The threeYouTube videos mentioned on this page illustrate the features of caMicroscope.
caMicroscope Markup Services
caMicroscope supports the creation of human markups. Users can create freeform shapes, rectangles and drop pins on areas of interest. In addition to adding geometric shapes, users can also associate annotations to markups. These annotations are structured descriptions. The form that is used to capture this description (blue box that slides in on the left) is template-driven and can be customized. The annotations and markups are managed in a customized MongoDB environment and is accessible via an API.
YouTube Video: caMicroscope Markup Services
This video has no sound. A description of the video follows.
Operator uses pre-defined annotation settings to describe the markup on a slide.
Operator zooms in on an area of interest.
Operator uses the drawing tool to mark up an area of interest.
Operator views the slide and then submits the annotation.
Operator shows way the annotation is being stored in a JSON file
caMicroscope Machine Generated Annotations
caMicroscope can display machine generated annotations and markups. We provide tools and libraries that can process segmentation results and display these as overlays on the image. Results from multiple segmentation algorithms can be displayed.
YouTube Video: caMicroscope Machine Generated Annotations
This video has no sound. A description of the video follows.
click on magnifying glass to show the algorithms that have been executed on the slide.
Markups are being showed on the slide depending on the selected zoom level, markups will appear and disappear
caMicroscope Dynamic Services
A demo showing how caMicroscope can be integrated with containerized image segmentation algorithms. This allows one to draw a Region-Of-Interest (ROI) and run an algorithm on that region.
This video has no sound. A description of the video follows.
YouTube Video: caMicroscope Dynamic Services
Zoom to region of interest
Select region of interest
Select the gear icon
place work order (select the algorithm that is supposed to be run on this area of interest).
Work order shows the coordinates for the region of interest
Enters an ID for the test (Test1) and notes field
Submit work order
Work order showed in KUE. This keeps track of the status of the work order.
Highlighted section of the window shows how the data is being transferred from caMicroscope to execution.
Green dots show the marked up features, which are the result of the algorithm that has been run on the area of interest.