Date
Attendees
| Name | Attended |
|---|---|
| Jayashree Kalpathy-Cramer | |
| Ulli Wagner | Yes |
| Carolyn Klinger | Yes |
| Benjamin Bearce | Yes |
Goals
- Status Update for Medici Helpdesk
Currently supported challenges
| Name of Challenge | Organization / Meeting | Medici instance used | Release | Release Test data | Number of Participants | Closing Date | Will the challenge remain open? | Comments |
|---|---|---|---|---|---|---|---|---|
Computed tomography ventilation imaging evaluation 2019 (CTVIE19): AAPM Lung Challenge | AAPM OK | http://aapmchallenges.cloudapp.net/competitions/35 | April 5,2019 | April 5,2019 | 56 individuals or teams | May 31,2019 | Yes | Conversation with organizer ongoing. Organizer processes data on his end; use of Medici somewhat limited User can no longer submit; data is being evaluated |
AAPM Head/Neck Challenge AAPM RT-MAC Challenge | AAPM OK | http://aapmchallenges.cloudapp.net/competitions/34 | April 16, 2019 | Pre-AAPM June 7, 2019 AAPM Live Challenge July 15, 2019 | 58 individuals or teams | See description of challenge for details / phases | Competition to start on April 15. | |
| MICCAI Brain Tumor challenge | MICCAI
| June | Test phase has ended on 9/18/2019. | Max 5 submissions per account (can be a team or an individual) | Competition was officially accepted for the MICCAI conference. Top participants will go to MICCAI. | 2020/01/23 First link was within NCI, first and second URL are duplicates. NCI instance has been taken down. | ||
| QIN Breast Challenge | Paul Kinahan University of Washington = challenge organizer Awaiting responses from him to be able to setup page/competition | Release dates currently pending from the organizers. Organized with Keyvan Farahani |
Potential challenges:
| Name of Challenge | Organization / Meeting | Medici instance used | Release | Release Test data | Number of Participants | Closing Date | Will the challengeremainopen? | Comments |
|---|---|---|---|---|---|---|---|---|
| MRI deidentification for NF event | Robert Allaway from Sage Bionetworks and Wenli Cai from MGH. | na | na | na | na | na | na | A Hackathon for the NF Conference. The hackathon is a competition to NF volumetric image analysis, which is a three days event for participants to compete for the solutions to some clinical challenges to NF imaging. |
| MICCAI 2020 | MICCAI has approved it | |||||||
| QIN PET-FDG | blanket approval |
Discussion items
| Time | Item | Who | Notes |
|---|---|---|---|
| Action Items |
| ||
| New challenge | BMMR2: Breast Multiparametric MRI for prediction of NAC Response (Organizer David Newitt, UCSF)
| ||
| Contract | contract modification has been executed, the period of performance until August 30, 2021 | ||
| Monthly status reports | see above | ||
| Contract / invoice status | The June invoice received. Need July and August to close out the contract year ending 8/30/2020. Submit cloud service invoices with the invoices for labor costs (needs to be handled at MGH). | ||
| PIV card / GFE laptop / VPN | On hold. | ||
| DICOM and FHIR on MS Azure | |||
| JIRA | |||
| MICCAI 2020 status | Short paper submission is done. The site showed multiple submissions per group, but those were failed submissions. The team discussed how to present during the virtual conference. The test phase is going to end tonight. The Docker images will be submitted over the next week and a half. Ben and Keyvan will then run the Docker images. Ben is to confirm with Tahsin and Spyros that participants should submit Docker images to a specific repository. | ||
| Paper | The draft will be submitted by September 15, 2020. - Not received | ||
| Videos |
| ||
| Other challenges |
older still open challenges In the next few weeks, Medici might be used by MGH for challenges. It might be a separate effort. | ||
| Reopening old challenges | Funding was provided with the contract. Find out if folks have used the older challenges before deciding on more challenges. | ||
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| Strategy meeting |
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| Incoming help desk requests | |||
| Other work |
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