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This page provides examples for the nano-TAB Investigation files, leveraging data from the Nanotechnology Characterization Laboratory (NCL) as an example (NCL200612A).

TABLE 2. nano-TAB Investigation File Extensions to ISA-TAB

Section

Field

Field Status (if applicable)

INVESTIGATION

Investigation disease

Required

INVESTIGATION

Investigation disease term accession number

Required

INVESTIGATION

Investigation disease term source REF

Required

INVESTIGATION

Investigation outcome

Optional

STUDY

Study disease

Required

STUDY

Study disease term accession number

Required

STUDY

Study disease term source REF

Required

STUDY

Study outcome

Optional

STUDY ASSAYS

Study assay measurement name

Required

STUDY ASSAYS

Study assay measurement name term accession number

Required

STUDY ASSAYS

Study assay measurement name term source REF

Required

STUDY ASSAYS

Study assay measurement unit

Required

STUDY ASSAYS

Study assay measurement unit term accession number

Required

STUDY ASSAYS

Study assay measurement unit term source REF

Required

STUDY ASSAYS

Study assay measurement statistic

Required

STUDY ASSAYS

Study assay measurement statistic term accession number

Required

STUDY ASSAYS

Study assay measurement statistic term source REF

Required

STUDY FACTORS

Study factor unit

Required

STUDY FACTORS

Study factor unit term accession  number

Required

STUDY FACTORS

Study factor unit term source REF.

Required

STUDY PROTOCOLS

Study protocol parameter unit

Required

STUDY PROTOCOLS

Study protocol parameter unit term accession number

Required

STUDY PROTOCOLS

Study protocol parameter unit term source REF

Required

Ontology Source Reference

TABLE 3: Example Investigation File Ontology Source Reference Section

Investigation

TABLE 4: Example Investigation File Investigation Section

Investigation Contacts

TABLE 5: Example Investigation File Investigation Contacts Section

Investigation Publication

TABLE 6. Example Investigation Publication Section

Study

TABLE 7. Example Investigation File Study Section

Study Design Descriptors

TABLE 8. Example Investigation File Study Design Descriptors Section

Study Contacts

TABLE 9. Example Investigation File Study Contacts Section

Study Publications

TABLE 10. Example Investigation File Study Publications Section

Study Assays

TABLE 11. Example Investigation File Study Assays Section

Study Factors

TABLE 12. Example Investigation File Study Factors Section

Study Protocols

TABLE 13. Example Investigation File Study Protocols Section

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