The CDE Browser can be used to download collections of meta data describing data held in repositories for cancer research and clinical trials. These CDEs can be downloaded in Excel or XML Format. However, it is not always easy to find the desired collection, as CDEs are organized in the Navigation Tree by Context, not topic. Attempting to download all the Released CDEs would result in a file that is too large for an Excel download. The canned collections in the following list are provided for your convenience.
Here are some XSLT files that transform CDEs and Forms in XML format to a file suitable for uploading to REDCap:
- CDE XML Download to REDCap CSV as of 6/26/2012
- Form Cart XML to REDCap CSV
Current Downloads:
- Adverse Event and Series Adverse Event NCI CRF Standards created on June 29th, 2012
- Concomitant Medication NCI CRF Standards created on August 8th, 2012
- Demography NCI CRF Standards created on June 29th, 2012
- End of Form NCI CRF Standards created on June 29th, 2012
- Enrollment NCI CRF Standards created on August 3rd, 2012
- Footer NCI CRF Standards created on June 29th, 2012
- Header NCI CRF Standards created on June 29th, 2012
- Laboratory Test Results NCI CRF Standards created on June 29th, 2012
- Medical History NCI CRF Standards created on June 29th, 2012
- Participant Identification NCI CRF Standards created on June 29th, 2012
- Physical Examination NCI CRF Standards created on June 29th, 2012
- Prior Post (Other) Therapies NCI CRF Standard created on June 29th, 2012
- Protocol Deviations NCI CRF Standards created on June 29th, 2012
- Registration NCI CRF Standards created on June 29th, 2012
- Staging/Extent of Disease NCI CRF Standards created on June 29th, 2012
- Staging Breast NCI CRF Standards in Excel
- Staging Cervix Uteri NCI CRF Standards in Excel
- Staging Colon and Rectum NCI CRF Standards in Excel
- Staging Corpus Uteri Carcinoma NCI CRF Standards in Excel
- Staging Corpus Uteri Sarcoma NCI CRF Standards in Excel
- Staging Fallopian Tube NCI CRF Standards in Excel
- Staging Gestational Trophoblastic NCI CRF Standards in Excel
- Staging Leukemia NCI CRF Standards in Excel
- Staging Liver NCI CRF Standards in Excel
- Staging Lymphoma (Including Hodgkins) NCI CRF Standards in Excel
- Staging Melanoma of the Skin NCI CRF Standards in Excel
- Staging Myeloma NCI CRF Standards in Excel
- Staging Ovary NCI CRF Standards in Excel
- Staging Pancreas NCI CRF Standards in Excel
- Staging Prostate NCI CRF Standards in Excel
- Staging Soft Tissue Sarcoma NCI CRF Standards in Excel
- Staging Stomach NCI CRF Standards in Excel
- Staging Thyroid NCI CRF Standards in Excel
- Staging Urinary Bladder NCI CRF Standards in Excel
- Staging Vagina NCI CRF Standards in Excel
- Staging Vulva NCI CRF Standards in Excel
- Study Agent Administration NCI CRF Standards created on June 29th, 2012
- All non-retired production CDEs (CDEs that do not have Workflow status = "RETIRED....") as of June 25, 2012
- All production CDEs with Registration Status = "STANDARD" as of Jan 27, 2012
- TCGA Phase II Data Elements - as of Oct. 19, 2011
- North American Central Cancer Registries (NAACCR) meta data elements (CDEs)
- NAACCR 11.1 CDEs in Excel - as of Dec 17, 2010
- NAACCR 11.1 CDEs in XML - as of Dec 17, 2010
- NAACCR 12.1 CDEs in Excel - as of April 23, 2012
- NAACCR 12.1 CDEs in XML - as of April 23, 2012
- Surveillance, Epidemiology and End Results (SEER) meta data elements (CDEs) - as of Dec 23, 2010
- BRIDG metadata elements (CDEs) - as of Feb 03, 2011
- National Biomedical Imaging Archive (NBIA)(formerly NCIA)- as of Feb 09, 2011
- Health Information National Trends Survey (HINTS2005)- as of April 04, 2012
- eMerge Project - as of April 09, 2012
For other formats and prior versions of the files see the attachments listed at the end of this page.
If importing caDSR content into another ISO/IEC 11179 registry, i.e. local implementation of cgMDR, please add the caDSR Registration Authority Identifier (RAI) 2.16.840.1.113883.3.26.2 to the metadata to keep the caDSR content distinct from the local repository. Per ISO/IEC 11179, the RAI is part of a globally unique identifier known as the IRID (Item Registry Identifier), and uniquely identifies registry content as being related to particular registrars. The IRID for all caDSR content is the <caDSR OID + Item public Id + item version>. For example, if the caDSR item public id = 2181292, version = 1.1, when importing you would add the RAI, and the result would be an IRID = 2.16.840.1.113883.3.26.2 + 2181292 + 1.1.
Coming soon! A link to cancerGrid UK cgMDR PTCRi (Particle Therapy Cancer Research) instance of cgMDR where you can download metadata elements in caDSR XML format, the native cgMDR format for importing into your own cgMDR instance, as well as an XML Schema annotated with W3C SAWSDL annotation tags.
The following lists the attachments to this page.
