Uploading Investigation-Study-Assay (ISA) data to the CSSI DCC data portal allows you to curate, manage, and reuse datasets in a standards-compliant way. The ISA-TAB specification describes this standard and how to structure your ISA data to create an ISA-TAB archive file. An ISA-TAB archive file is a compressed (.ZIP) file containing multiple text files and data files.
Each text file in an ISA-TAB archive file describes the structure, meaning the column headers when considered in spreadsheet format, of the Investigation, Study, and Assay components of the template. The data files correspond to each assay and are included in the archive in their native format, for example, Microsoft Excel.
Users who are logged in to the CSSI DCC Portal can upload Investigation-Study-Assay (ISA) data. Before you upload a template to this repository, you must create and configure it using open-source software made for this purpose.
You create a template in the CSSI DCC Portal first and then add an ISA-TAB template archive file to it.
Files that you upload to the portal must be in one of the following archive formats: .zip
, .rar
, .tar
, or .gz
. Each file must be no larger than 500 MB.
To upload a template
Select the file you want to upload by either
dragging and dropping the ISA-TAB archive file from your computer to the File box, or
clicking Add files to navigate to where the file is stored.
Template files must be in one of the following archive formats: .zip
,.rar
,.tar
,.gz
. The file can be no larger than 500 MB.