This guide explains how to use the administrative features of the National Biomedical Imaging Archive (NBIA).

Administration Functions Overview

Security applies to all administration tools in NBIA. When you log into NBIA, only the administration tools for which you have been granted permissions are visible in the Admin menu. Their use is described on this page.

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Creating a New NBIA User

Only an NBIA administrator can create new users for NBIA.

Before NBIA users can be created, an administrator with access to the User Authorization Tool must register the NCIA application and assign an administrative user to the NCIA application there. The administrator can then assign users to NBIA and roles to each user. The following table describes the role structure in NBIA.

Role

Functionality

Can Perform Operation

NCIA.READ

Search capability

Everything else

Note: This role is applied to guest users.

NCIA.MANAGE_VISIBILITY_STATUS

Access the QC Tool

Use the QC Tool

NCIA.VIEW_SUBMISSION_REPORT

Access and verify a submission

View Submission Report

NCIA.MANAGE_COLLECTION_DESCRIPTION

Edit a collection description

Edit Collection Description

NCIA.SUPER_CURATOR

Create, edit, and delete workflow items

Review and delete saved queries

Approve the deletion of image series

Delete a shared list

Manage Workflow Items

Manage Saved Queries

Approve Deletions

Manage Shared List

NCIA.DELETE_ADMIN

Delete images approved for deletion

Perform Online Deletion

NCIA.ADMINUse the User Authorization Tool

Use the User Authorization Tool

Note: This role is also needed to access CSM UPT.

The roles you assign allow a user to perform tasks in NBIA. Additionally, an administrator can perform the following tasks:

Do not use special characters in user names. You can use special characters in passwords.

For more information about creating new NBIA users/user groups and performing other tasks in the User Authorization Tool, see the User Authorization Tool documentation.

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Using the QC Tool

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Deleting Image Series

As an administrator, you can assist in the two-tier process of deleting NBIA data. To do so, you must have been granted specific roles. For more information about the roles and the deletion processes, see Approving Image Deletions and Manually Deleting Image Series.

Approving Image Deletions

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Manually Deleting Image Series

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Viewing Submission Reports

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Accrual Report

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Image Submission Report

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Annotation Submission Report

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Editing a Collection Description

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Managing Workflow Items

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Managing Saved Queries

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Using the User Authorization Tool

NBIA role required to use this feature: NCIA.ADMIN

For more information about roles, see Creating a New NBIA User.

Administrators use the User Authorization tool to manage data access by users, user groups, protection groups, and roles.

Topics in this section include:

Accessing the User Authorization Tool

To access and use the User Authorization Tool, you must be an NBIA administrator.

  1. Log in to NBIA.
  2. Select Admin > User Authorization Tool.
    The User Authorization Tool appears, open to the User tab.

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Managing Users

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Managing Protection Elements

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Managing Protection Groups

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Managing User Groups

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Adding Protection Groups and Assigning Roles

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Resolving Errors in the User Authorization Tool

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