Topic: caArray Usage
Release: caArray 2.0 and above
Date entered: 05/28/2011
What are the columns that are required for an Illumina csv datafile? There are many columns in an Illumina csv data file. Which ones are required by caArray?
Required Fields |
---|
Probe_ID/ID_REF |
AVG_Signal (prefixed with "<hygridixation_name>" or suffixed with "-<hybridization_name>") |
Detection/DetectionPVal/Detection Pval (prefixed with "<hygridixation_name>" or suffixed with "-<hybridization_name>") |
Required Fields |
---|
TargetID |
ProbeId |
AVG_Signal (prefixed with "<hygridixation_name>" or suffixed with "-<hybridization_name>") |
Detection/DetectionPVal/Detection Pval (prefixed with "<hygridixation_name>" or suffixed with "-<hybridization_name>") |
Fields |
---|
MIN_Signal |
MAX_Signal |
NARRAYS |
ARRAY_STDEV |
BEAD_STDEV |
Avg_NBEADS |
Please leave your comment in the caArray End User Forum.