Attendees

Name

Role

Present

Remennik, LyubovNIH/NCI

Safran, Tracy

NIH/NCI [C]
Ong, Kim LNIH/NCI [C]
Lucas, Jason RNIH/NCI [C]
Bauer, Scott  NIH/NCI [C]
Alkis, BarryNIH/NCI [C]
Solie, ChuckNIH/NCI [C]
Truong, TracyNIH/NCI [C]
Kondareddy, SwathiNIH/NCI [C]
Singh, ItendraNIH/NCI [C]
Zhang, ChaoNIH/NCI [C]
Johnson, ConnieNIH/NCI [C]
Whiteman, LoriNIH/NCI [C]
Benson, MarkNIH/NCI [C]
Andrew MooreNIH/NCI [C]

Agenda

EVS Discussion


SYSTEMS
Systems

Discussion Points:

    • Jenkins having issues running Java8
      • NCIt browser had issues on Monday
    • Status of migration on new QA tier.
      • lexevsapi splash page not working on QA2. Needs to redirect to wiki
      • term suggestion needs to be examined

Decision Points:


LEXEVS UPDATES

LexEVS Sprint Status


Current Sprint - Sprint 201 (Dec 9 – Dec 20 2022)

16X237 Agile Development - Sprint Status#16X237AgileDevelopmentSprintStatus-Sprint199
  • Activities
    • LexEVS CTS2 Service - on QA. 
    • Report Exporter - On Dev
    • Vue3 Updates for Report Exporter 
    • Working on updating browser for Spring 5 - on dev

Metathesaurus issue

  • On Prod
Future Planning

Discussion Points:

 Planning for Mayo team in the coming fiscal year:

  • Java 8 implications
    • Do code inventory for other dependencies
      • Possibly 2-3 weeks
    • Update to 11 or 17 - TTruong suggested 11.
    • Mark requested to look into this more closely


CTS2 Mapping/URI Resolver

Discussion Points:

  • On QA2 and QA1 - Appscan requested

Decision Points:

caDSR Query

Review requirements for caDSR query

  • They have been provided a flat file for NCIt
    • Adding a new column
  • Still waiting on full requirements for additional terminologies
  • All questions about NCIt and other vocabularies should include Lyubov, Jason, Lori and Mark, and limited people beyond that.

Statistics Dashboard

Discussion Points: 

  • All reports sent out last week

Decision Points:

Comparison/Mapping Tool

Discussion Points:

  • Probably not starting until a few months into 2023

Decision Points:

EVS transition to virtual machines

Discussion Points:

  • Server Migration 2021
    • Stage - goal to finish QA2 first. 
      • Instance of VM instantiated. Needs configuration
    • Meeting occurred. Server updated.
      • Term suggestion status - Chuck to check on this

Decision Points:

Report Exporter

Discussion Points:

  • Tomcat and Spring Vulnerability noted on the Report Exporter
    • Code completed. Being tested on Dev
    • Working on QA deployment - issues with github.
      • Appears resolved, being tested
  • ATO expired earlier this year (Authorization to Operate)
  • Working on update to Vue3 (JavaScript Framework).
    • ~ 2 month - on week 7 of estimated 8 -
      • delayed due to high priority white label error work 
      • 3 different phases
        • Dependencies updated - complete
        • Squashing errors generated from update - complete?
        • Unit testing
          • bug squashing from this
    • Looking at updating beyond Java 8

Decision Points:

AWS Cloud to be in Separate Account

Discussion Points

  • No Response as of yet

Decision Points:

Team Absences


Mayo Team 

MSC - Jason out Christmas week

Leidos 

Systems - 


EVS SERVICE AND ARCHITECTURE GROUP UPDATES
EVS Service and Architecture Group

Discussion Points:

Decision Points:


DATA UPDATES
Data

Discussion Points: 

  • Timing for next NCIm update. Probably February-March
  • Adding column to flat file - impacts
    • Flat file input to any processes? No
    • Current last column allowed to be empty?
    • Update of documentation - scheduled
    • Notify users of new format - on monthly announcement
  • All December data deployed

Decision Points:


BROWSER UPDATES

Browser

Discussion Points:

  • Meta on Prod
  • Issue with ICD-O-3 display on Terms Browser fix is on QA
    • Related to FTP change that truncated displayed file name

Decision Points: 


QA UPDATES

QA

Discussion Points:  (see chart)

  • December data testing complete
  • tag deploy on NCIm
  • tag deploy on NCI Terms being tested on QA
  • Report Exporter waiting on Dev testing by Mayo

Decision Points: 



TERMINOLOGIES LIFECYCLE REPORT

Terminology Updates and Schedule 

Discussion Points: 

Decision Points: 

Mark Benson TPM UpdateWorking to schedule time for NCIm Browser fix post mortem

LexEVS Spring Migration Progress



Spring Related Update

Estimated Effort

Status

Ivy Dependency Update3 daysComplete
Ibatis to Mybatis xml conversion3 daysComplete
Compile capable code conversion3 daysComplete
Application context startup1 week Complete
CodingSchemeDao Verification tests / Code Corrections10 daysComplete
Association Dao Verification tests  / Code Corrections10 daysComplete
Registry Dao Verification  / Code Corrections10 daysComplete
Coded Node Graph Dao / Code Corrections10 daysComplete
Entity Dao / Code Corrections10 daysComplete
NCI History Dao / Code Corrections3 daysComplete
Property Dao / Code Corrections10 daysComplete
Revision Dao / Code Corrections2 daysComplete
System Release Dao / Code Corrections1 dayComplete
Pick List Dao / Code Corrections1 week Complete
Pick List Entry Dao / Code Corrections1 week Complete
Source Asserted Value Set Dao / Code Corrections2 daysComplete
Value Set Definitions Dao / Code Corrections10 daysComplete
Value set Hierarchy Dao / Code Corrections1 dayComplete
Vaue set Definition Entry Dao / Code Corrections2 daysComplete
Value Set Entry State Dao / Code Corrections2 daysComplete
Value Set Property Dao / Code Corrections1 week Complete
Versions Dao / Code Corrections2 daysComplete
Testing/ Verification2 weeks Complete*
Load tests 2 weeksOn Hold
Testing verification Recoding10 daysComplete
Full system test1 dayTriaged
LexEVS Remote3-4 weeksTriaged
LexEVS CTS2 Service2-3 weeksComplete
LexEVS CTS2 Service2 weeksComplete
LexEVS CTS2 Deployment2 daysComplete
Browser Deployment Debug1 weekPull request in
QA2 weeksIn Progress
Total Effort (Approximately)4-5 months

Vocabularies Slated for Production

 Terminology Updates and Schedule


Vocabulary Name

Local Name

Version

Arrival Date

Loaded to data-qa DB

Date to Stage

Date to Production

Vocabulary Name in LexBIG

Short Name

Version identifier

Date the vocabulary arrived for processing

Has the vocabulary been loaded to the data-qa database?

Approximate date the vocabulary version is scheduled to move to staging

Approximate date the vocabulary version is scheduled to move to production

NCI ThesaurusNCIt22.11d11/28/2022yes12/06/2212/07/22
NCIt-HGNCNCIt-HGNCNov202211/28/2022yes12/06/2212/07/22
SwissProtSwissProtNov202211/28/2022yes12/06/2212/07/22
ChEBIChEBIv22012/06/22yes12/09/2212/12/22
GOGODec202212/06/22yes12/09/2212/12/22
HGNCHGNCDec202212/06/22yes12/09/2212/12/22

QA Schedule and Status

see QA Scheduling and Status



SECTION FOR FUNCTIONAL SYSTEM TESTING STATUS ::

Application and Version

Percentage Complete

Estimated Completion Date per Iteration

Priority Level 

Type Of Testing

Current Tier for Release (DEV, QA, Stage, Prod)

Expected Production Date

EVS REST API (v1.6)

100%

5/27/2022

High

Progression + Regression 

QA

6/6/2022

EVS Explore (v1.6)

100%

5/27/2022

High

Progression + Regression

QA

6/6/2022

EVS REST API(v1.6)

100%

6/1/2022

High

Regression

Stage

6/6/2022

EVS Explore(v1.6)

100%

6/2/2022

High

Regression

Stage

6/7/2022

EVS REST API(22.05e) - Monthly Data Deployment

100%

6/1/2022

High

Regression

Stage

6/3/2022

EVS REST API(22.05e) - Monthly Data Deployment

100%

6/3/2022

High

Regression

Production

6/3/2022

EVS REST API(v1.6)

100%

6/6/2022

High

Regression

Production

6/6/2022

EVS Explore(v1.6)

100%

6/7/2022

High

Regression

Production

6/7/2022

NCIt,NCIm,TermForm(22.05e + GO & HGNC Jun 2022 Deployment)

100%

6/3/2022

High

Regression

Stage

6/6/2022

NCIt,NCIm,TermForm(22.05e + GO & HGNC Jun 2022 Deployment)

100%

6/6/2022

High

Regression

Production

6/8/2022

EVS REST API(22.06d) - Monthly Data Deployment

100%

6/30/2022

High

Regression

Stage , Production

6/30/2022

NCIt,NCIm,TermForm(22.06d) - Monthly Data Deployment

100%

7/8/2022

High

Smoke

Stage,Production

7/8/2022

NCIt,NCIm,TermForm(22.05e + GO & HGNC Jun 2022 Deployment)

100%

6/3/2022

High

Regression

Stage

6/6/2022

NCIt,NCIm,TermForm(22.06d) - Monthly Data Deployment100%7/8/2022HighSmokeStage,Production7/8/2022
NCIt,NCIm,TermForm(ChEBI, GO & HGNC July 2022 Deployment)100%7/12/2022HighSmokeStage7/12/2022
NCIt,NCIm,TermForm(ChEBI, GO & HGNC July 2022 Deployment)100%7/13/2022HighSmokeProduction7/13/2022

EVS REST API(22.07d) - Monthly Data Deployment

100%

7/27/2022

High

Regression

Stage , Production

7/27/2022

NCIt,NCIm,TermForm(22.07d) - Monthly Data  Deployment100%8/1/2022HighSmokeStage,Production8/1/2022
NCIt,NCIm,TermForm(CanMED, GO & HGNC AUG 2022 Deployment)100%8/3/2022HighSmokeStage,Production8/3/2022

EVS REST API - 1.6.1 (Hot Fix Deployment)

100 %

8/3/2022

Highest

Progression + Regression

Stage,Production

8/4/2022





JIRA Issues


Recent EVS Stats Dashboard Related Bugs and Features (within last week)

Recent Report Exporter Related Bugs and Features (within last week)

Recent LexEVS Related Bugs and Features (within last week)

Recent CTS2 Service Related Issues (within last week)

6.5 LexEVS Related Issues

6.5 CTS2 Service Related Issues