Agenda

EVS Discussion


SYSTEMS
Systems

Discussion Points:

  • Jenkins having issues running Java8
    • EOL Sep '23
    • Waiting for info on migration deadlines
    • Implications for Tomcat containers
    • JREs available on servers
  • Status of migration on new QA tier.
    • URL repointing needed
      • Being worked on to cut traffic over - 
      • Swathi says it can happen this afternoon
  • Stage migration status
    • Not yet started
  • Systems contract changing vendors in January 2023
    • Some personnel changes expected
    • Migration plan
    • New systems contract still being worked on.
  • Semantics URL to be applied to Stage tier - handed to other team, Chuck to chase down
  • Stardog license shift to new server

Decision Points:


LEXEVS UPDATES

LexEVS Sprint Status


Current Sprint - Sprint 203 (Jan 15 – Jan 29 2023)

16X237 Agile Development - Sprint Status#16X237AgileDevelopmentSprintStatus-Sprint203
  • Sprint will shift to every other Monday
  • LexEVS CTS2 Service - false positive accepted
  • Report Exporter - Deployed to Stage, request to Prod
  • Vue3 Updates for Report Exporter nearing completion
  • Working on updating browser for Spring 5 - on dev
Future Planning

Discussion Points:

 Planning for Mayo team in the coming fiscal year:

  • Java 8 implications
    • Do code inventory for Java migration
      • Report sent - as Excel spreadsheet
      • Need LoE estimation and prioritization
        • Plans being worked on over the next week
      • Need risk assessment of the work - what is the risk of NOT doing things
  • Would like to see this in a checklist, similar to Spring 5 chart (below)
    • Should include a schedule.
    • Report Due 13th
    • Would like intermediate report before then
    • Meet as part of Wed debrief

CTS2 Mapping/URI Resolver

Discussion Points:

  • Configuration fix - Fixed, on QA
    • Stage config, fixed with pom file update.
    • QA passed, Netsparker requested

Decision Points:

caDSR Query

Have been asking for other standalone terminologies, expected that they will use CTS2

Statistics Dashboard

Discussion Points: 

  • Monthly report complete
  • Yearly report submitted - any feedback?
    • Resend this
  • Google analytics - Retiring GA and going to GA4
    • May need to only update GA, not applications. 
      • Need further experimentation, documentation
      • Per Kim - looks like scripts need to be updated from GA3 to GA4
    • No analytics being collected by EVS Explore
    • Add to Report Exporter and EVS Compare
      • Create tokens for these - TS
    • TS to do paragraph on how to migrate

Decision Points:

Comparison/Mapping Tool

Discussion Points:

  • March timeframe

Decision Points:

EVS transition to virtual machines

Discussion Points:

  • Server Migration 2021
    • QA
      • Needs URLs repointed
    • Stage 
      • Instance of VM instantiated. Needs configuration
      • Followed by Prod then DataQA

Decision Points:

Report Exporter

Discussion Points:

  • Tomcat and Spring Vulnerability noted on the Report Exporter
    • Deployed on Stage
    • Request put in for Prod
  • Working on update to Vue3 (JavaScript Framework). EVSREPEXP-451
    • ~ 2 month - on week 7 of estimated 8 -
      • On Dev and being regression tested
      • 3 different phases
        • Dependencies updated - complete
        • Squashing errors generated from update - complete
        • Unit testing
          • bug squashing from this - in progress
  • Look at updating to Java 11 - code inventory work
    • Code inventory work

Decision Points:

AWS Cloud to be in Separate Account

Discussion Points

  • No Response as of yet

Decision Points:

Team Absences


Mayo Team - Scott off 20-27

MSC -

Leidos -

Systems - 


EVS SERVICE AND ARCHITECTURE GROUP UPDATES
EVS Service and Architecture Group

Discussion Points:

  • Remote API and URI Resolver
    • Looking at 3 months - April timeframe 
    • Need an announcement sent out ahead of time - Mayo to draft paragraph for announcement, send to Lyubov and Lori

Decision Points:


DATA UPDATES
Data

Discussion Points: 

  • 22.12d on Prod and verified
    • During deployments, URL is repointed to paired server.  Security may be interfering with this repointing
      • This will require using direct URLs when testing rather than the DNS alias
    • QA has requested emails requesting data verification to be clearly labeled. NCIt or monthlies should be specified.
    • Perhaps change QA requirements for editors on upper tiers
  • Monthly terms should be on Stage later today

Decision Points:


BROWSER UPDATES

Browser

Discussion Points:

  • Nothing new this week

Decision Points: 


QA UPDATES

QA

Discussion Points:  (see chart)

  • Report Exporter on Stage reviewed
  • CTS2 tested on QA
  • NCIt 22.12d verified on Prod
  • EVSRestAPI and EVS Explore now being tested on QA
  • Deployment downtime this afternoon - notification sent

Decision Points: 



TERMINOLOGIES LIFECYCLE REPORT

Terminology Updates and Schedule 

Discussion Points: 

Decision Points: 

Mark Benson TPM Update
  • Refactoring plan being updated.

LexEVS Spring Migration Progress



Spring Related Update

Estimated Effort

Status

Ivy Dependency Update3 daysComplete
Ibatis to Mybatis xml conversion3 daysComplete
Compile capable code conversion3 daysComplete
Application context startup1 week Complete
CodingSchemeDao Verification tests / Code Corrections10 daysComplete
Association Dao Verification tests  / Code Corrections10 daysComplete
Registry Dao Verification  / Code Corrections10 daysComplete
Coded Node Graph Dao / Code Corrections10 daysComplete
Entity Dao / Code Corrections10 daysComplete
NCI History Dao / Code Corrections3 daysComplete
Property Dao / Code Corrections10 daysComplete
Revision Dao / Code Corrections2 daysComplete
System Release Dao / Code Corrections1 dayComplete
Pick List Dao / Code Corrections1 week Complete
Pick List Entry Dao / Code Corrections1 week Complete
Source Asserted Value Set Dao / Code Corrections2 daysComplete
Value Set Definitions Dao / Code Corrections10 daysComplete
Value set Hierarchy Dao / Code Corrections1 dayComplete
Vaue set Definition Entry Dao / Code Corrections2 daysComplete
Value Set Entry State Dao / Code Corrections2 daysComplete
Value Set Property Dao / Code Corrections1 week Complete
Versions Dao / Code Corrections2 daysComplete
Testing/ Verification2 weeks Complete*
Loader tests 2 weeksTriaged-Complete
Testing verification Recoding10 daysComplete
Full system test1 dayTriaged-Complete
LexEVS Remote3-4 weeksTriaged-Complete
LexEVS CTS2 Service2-3 weeksComplete
LexEVS CTS2 Service2 weeksComplete
LexEVS CTS2 Deployment2 daysComplete
Browser Deployment Debug1 weekIn Progress
QA2 weeksIn Progress - Netsparker block
Total Effort (Approximately)4-5 months

Vocabularies Slated for Production

 Terminology Updates and Schedule


Vocabulary Name

Local Name

Version

Arrival Date

Loaded to data-qa DB

Date to Stage

Date to Production

Vocabulary Name in LexBIG

Short Name

Version identifier

Date the vocabulary arrived for processing

Has the vocabulary been loaded to the data-qa database?

Approximate date the vocabulary version is scheduled to move to staging

Approximate date the vocabulary version is scheduled to move to production

NCI ThesaurusNCIt22.12d12/27/2022yes01/11/2301/17/23
NCIt-HGNCNCIt-HGNCDec202212/27/2022yes01/11/2301/17/23
SwissProtSwissProtDec202212/27/2022yes01/11/2301/17/23
ChEBIChEBIv21701/12/23yes01/18/2301/19/23
GOGOJan202301/12/23yes01/18/2301/19/23
HGNCHGNCJan202301/12/23yes01/18/2301/19/23

QA Schedule and Status

see QA Scheduling and Status



SECTION FOR FUNCTIONAL SYSTEM TESTING STATUS ::

Application and Version

Percentage Complete

Estimated Completion Date per Iteration

Priority Level 

Type Of Testing

Current Tier for Release (DEV, QA, Stage, Prod)

Expected Production Date

EVS REST API (v1.6)

100%

5/27/2022

High

Progression + Regression 

QA

6/6/2022

EVS Explore (v1.6)

100%

5/27/2022

High

Progression + Regression

QA

6/6/2022

EVS REST API(v1.6)

100%

6/1/2022

High

Regression

Stage

6/6/2022

EVS Explore(v1.6)

100%

6/2/2022

High

Regression

Stage

6/7/2022

EVS REST API(22.05e) - Monthly Data Deployment

100%

6/1/2022

High

Regression

Stage

6/3/2022

EVS REST API(22.05e) - Monthly Data Deployment

100%

6/3/2022

High

Regression

Production

6/3/2022

EVS REST API(v1.6)

100%

6/6/2022

High

Regression

Production

6/6/2022

EVS Explore(v1.6)

100%

6/7/2022

High

Regression

Production

6/7/2022

NCIt,NCIm,TermForm(22.05e + GO & HGNC Jun 2022 Deployment)

100%

6/3/2022

High

Regression

Stage

6/6/2022

NCIt,NCIm,TermForm(22.05e + GO & HGNC Jun 2022 Deployment)

100%

6/6/2022

High

Regression

Production

6/8/2022

EVS REST API(22.06d) - Monthly Data Deployment

100%

6/30/2022

High

Regression

Stage , Production

6/30/2022

NCIt,NCIm,TermForm(22.06d) - Monthly Data Deployment

100%

7/8/2022

High

Smoke

Stage,Production

7/8/2022

NCIt,NCIm,TermForm(22.05e + GO & HGNC Jun 2022 Deployment)

100%

6/3/2022

High

Regression

Stage

6/6/2022

NCIt,NCIm,TermForm(22.06d) - Monthly Data Deployment100%7/8/2022HighSmokeStage,Production7/8/2022
NCIt,NCIm,TermForm(ChEBI, GO & HGNC July 2022 Deployment)100%7/12/2022HighSmokeStage7/12/2022
NCIt,NCIm,TermForm(ChEBI, GO & HGNC July 2022 Deployment)100%7/13/2022HighSmokeProduction7/13/2022

EVS REST API(22.07d) - Monthly Data Deployment

100%

7/27/2022

High

Regression

Stage , Production

7/27/2022

NCIt,NCIm,TermForm(22.07d) - Monthly Data  Deployment100%8/1/2022HighSmokeStage,Production8/1/2022
NCIt,NCIm,TermForm(CanMED, GO & HGNC AUG 2022 Deployment)100%8/3/2022HighSmokeStage,Production8/3/2022

EVS REST API - 1.6.1 (Hot Fix Deployment)

100 %

8/3/2022

Highest

Progression + Regression

Stage,Production

8/4/2022


Attendees

Name

Role

Present

Remennik, LyubovNIH/NCI

Safran, Tracy

NIH/NCI [C]
Ong, Kim LNIH/NCI [C]
Lucas, Jason RNIH/NCI [C]
Bauer, Scott  NIH/NCI [C]
Alkis, BarryNIH/NCI [C]
Solie, ChuckNIH/NCI [C]
Truong, TracyNIH/NCI [C]
Kondareddy, SwathiNIH/NCI [C]
Singh, ItendraNIH/NCI [C]
Zhang, ChaoNIH/NCI [C]
Johnson, ConnieNIH/NCI [C]
Whiteman, LoriNIH/NCI [C]
Benson, MarkNIH/NCI [C]
Andrew MooreNIH/NCI [C]



JIRA Issues


Recent EVS Stats Dashboard Related Bugs and Features (within last week)

Recent Report Exporter Related Bugs and Features (within last week)

Recent LexEVS Related Bugs and Features (within last week)

Recent CTS2 Service Related Issues (within last week)

6.5 LexEVS Related Issues

6.5 CTS2 Service Related Issues