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h2. Tool Overview

{multiexcerpt:name=caIntegrator} !Caintegrator.jpg|alt="caIntegrator logo",width=300px! caIntegrator is a web-based software application that allows researchers to set up custom, caBIG®-compatible web portals to conduct integrative research, without requiring programming experience. These portals bring together heterogeneous clinical, microarray and medical imaging data to enrich multidisciplinary research.{multiexcerpt}

h2. What's New

For news and events, visit [caIntegrator:What's new for caIntegrator].

23 citations were added to [caIntegrator:caIntegrator Citations].

h2. At A Glance Details

*Current Version Number*: 1.3
*Release Date of Current Version:* June 2011
*Intended Audiences*: Researchers and bioinformaticians
*Primary Workspace*: ICR
*Currently caGrid Enabled*? Yes
*caBIG® Compatiblity Level*: Under review

*caIntegrator Public Server*: A public [caIntegrator|https://caintegrator2.nci.nih.gov/caintegrator2/login.action] hosted by NCI is free to community. A free account will be issued upon registration.

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h3. Technical Information

*Tool Maturity Assessment*: Stable Release (Adoption in Progress)
*Installation Level*: Intermediate - technical assistance may be required, download may require supporting infrastructure or software

h3. System Requirements

caIntegrator is an open-source, web-based J2EE Java application employing Spring, Struts 2 and Hibernate technologies. Full installation requires installation of JBoss 4.0.5; MySQL 5.0.45; ANT (Apache); JDK 1.5.

h2. Presentations, Demos and Other Materials

* [caIntegrator overview at the AACR 2011 Annual Meeting|caIntegrator:caIntegrator^CaIntegrator_Overview_AACR_2011_v2.ppt]
* [caIntegrator Brochure|https://ncisvn.nci.nih.gov/svn/caintegrator2/trunk/docs/project_management/external_meetings/caIntegrator_toolsheet_2010.pdf]
* [Overview and Demo of caIntegrator Slides and Screencast (make sure your speakers are on to play audio)|https://gforge.nci.nih.gov/svnroot/caintegrator2/trunk/docs/project_management/external_meetings/overview_screencast/overview_screencast.html]
* [Use Study Screencast (applicable up to caIntegrator2 1.0.1)|https://gforge.nci.nih.gov/svnroot/caintegrator2/trunk/docs/project_management/external_meetings/use_study_screencast/use_study.html] (make sure your speakers are on to play audio)
* [Deploy study Screencast (applicable up to caIntegrator2 1.0.1)|https://gforge.nci.nih.gov/svnroot/caintegrator2/trunk/docs/project_management/external_meetings/deploy_study_screencast/deploy_study_screencast.html] (make sure your speakers are on to play audio)

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h2. Documentation, Meetings and Training

h3. caIntegrator Meetings and Plans

Refer to the [caIntegrator:caIntegrator Roadmap].

h3. caIntegrator Documentation

|| End User || Technical || Download and Sample Data ||
| * [caIntegrator Online Help|https://caintegrator2.nci.nih.gov/caintegrator2/help/wwhelp/wwhimpl/js/html/wwhelp.htm?context=caIntegrator2&topic=add_annotation_group_help]
* [Users Guide|https://gforge.nci.nih.gov/frs/download.php/8869/caIntegrator_Users_Guide.pdf]
* [caIntegrator tool page|https://cabig.nci.nih.gov/tools/caIntegrator2] | * [Installation Guide|https://gforge.nci.nih.gov/frs/download.php/8868/caintegrator_1.2_installation_guide.pdf] | * [NCI hosted caIntegrator application is available on line|https://caintegrator2.nci.nih.gov/caintegrator2]
* [caIntegrator:caIntegrator Demo Data Download and Instructions for Use] |

h2. caIntegrator Knowledge Base

[caIntegrator FAQ and In-depth Articles|caIntegrator:caIntegrator FAQ and In-depth Articles] \- Find the answers to the most frequently asked questions; understand how caIntegrator works.

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h2. caIntegrator Demos

Visit [caIntegrator:caIntegrator Demos] for in depth information about caIntegrator.

h2. caIntegrator Case Studies

If you still don't know if caIntegrator is for you, refer to the [caIntegrator:caIntegrator Case Studies] to see examples of how caIntegrator could be used in different scenarios.

h2. caIntegrator Success Stories

Each institution could have its own unique setting and requirements. Visit [caIntegrator:caIntegrator Success Stories] and share your success or even not so successful a story here. Your input will help others.

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h2. caIntegrator Citations

Refer to the [caIntegrator:caIntegrator Citations] for a list of articles about caIntegrator.

h2. Installation and Downloads

* [Download, Install or Upgrade caIntegrator|https://gforge.nci.nih.gov/frs/?group_id=507]
* [NCI caIntegrator|https://caintegrator2.nci.nih.gov/caintegrator2] public server is free to whole community.

h2. Forum and Support for caIntegrator

|| Forum || Support || Archived Info ||
| * [End User Forum|https://cabig-kc.nci.nih.gov/Molecular/forums/viewforum.php?f=23&sid=e3a9147a19936d2b715e12a4c04a117f]
* [Developer Forum|https://cabig-kc.nci.nih.gov/Molecular/forums/viewforum.php?f=24&sid=9d821031a7ce174db55e28da13c59074] | * [caIntegrator wiki|https://wiki.nci.nih.gov/display/caIntegrator/caIntegrator+Wiki]
* [caIntegrator users Listserv|https://list.nih.gov/cgi-bin/wa.exe?A0=CAINTEGRATOR_USERS]
* ICR Workspace Coordinator: [Elaine Freund|mailto:efreund@3rdmill.com]
* [Application Support email|mailto:ncicb@pop.nci.nih.gov] | -- |

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h2. Submit defects and feature requests on caIntegrator

* [Report a Defect or Request a Feature at caIntegrator GForge Community Tracker|https://gforge.nci.nih.gov/tracker/?atid=2416&amp;group_id=507]

h2. Open-source development

* Link to [caIntegrator Open Development Code Base|https://gforge.nci.nih.gov/svnroot/caintegrator2/]

h2. Integration with other tools - caArray

caIntegrator currently only works with caArray 2.3.x and 2.4.x. Therefore, please make sure that the version of the caArray instance from which caInt2 retrieves data from is 2.3.0 and above.

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