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Agenda

EVS Discussion

Open System Tickets

Ticket Description Actions, Update
NCI-INC0805939
NCI-INC0805936
CTS2 down on Dev and QA
Met with Systems team to debug on Tu, Feb 27.
Waiting to hear back from Zihua on additional debugging work. 

NCI-RITM0512149

Security consult about IP traffic to Prod
Asked for dynamic IP throttling
NCI-INC0810790Report Exporter issue not avail on VPN
Open, escalated

NCI-RITM0513127

Give Zihua He access to apache logs
Having issues with collectors and access to logs star 

SCTASK0852270

Old Java version (1.7) on processing server
Completed, needs testing

 

Tomcat 9 installation on DEV
Open

 

FTP access for processing
Chuck Solie actively working, being reviewed

SYSTEMS
EVS transition to virtual machines

STATUS:

Prod2 server up and running - being tested

  • DECIDED: conversion first, then transition to VMs.  Likely end of March
  • URLs documented List of EVS URLs



LEXEVS UPDATES

Monthly Planning and Focus

Completed Sprint - Sprint 217 (Feb 2 - Mar 4) -

Current Sprint  - Sprint 218 (Mar 5 - Mar 29) - Sprint 218

For the month of March 2024

  • Report Exporter

    • Start work on templating

  • Improvements, Refactoring Code Debt, Feature development:
  • Implementation of Java 17
  • DataDog
  • NCI Terms Browser
Technical Debt remediation

LexEVS Code Debt Refactoring - Java 17 refactoring currently is in progress

  • Tomcat 9 partially installed on Dev.  Waiting on Java 8 cts2 problems to be resolved before asking for completion
OS Updates
  • QA conversions starting - Dev,QA, Stage updated for LexEVS. Some issues with CTS2 being debugged
    • First group of servers upating this week
    • Next group next week
    • LexEVS not scheduled yet - CTS2 issue
  • Protege and SIP in completed in Dev/QA/Stage
    • Kathy Coleman to notify when ready to go to Prod - plans being developed
Report Exporter
  • Working on templating starting
    • Doing phase 1 - updating description fields. Close to complete
  • Wait time indicator on Stage
    • Release notes written
    • Staging down, ticket entered
      • Works off VPN but not on VPN
      • Access to logs provided


Security
  • Notification 3/13 that lvg2015 on Processing server needs update as it relies on Java 7
    • lvg on server updated
    • Applications updated and waiting to upload to server
      • Coordinate with Chao and Eric


Statistics Dashboard

OBJECTIVE 
Complete Migration of Statistics Dashboard from SumoLogic to DataDog by March 2024.  Hard end in April (ish) - possibly end of June

STATUS

  • S3 bucket has been created
    • Should be working now
    • Needs testing of archiving and refresh
  • RUM installation completed
  • Collectors installed on all servers except evs.nci.nih.gov 
  • No apache logs being pulled in for on-prem servers - Cyrus reaching out to DataDog support
    • Zihua He working on configuring
    • Manish aware

Link: Sharepoint Project Task Checklist

Comparison/Mapping Tool

On Hold

AWS Cloud to be in Separate Account

Waiting on AWS team

Team Absences


Mayo Team - Andrew Mar 29, Apr 1

MSC - 

Leidos - 

QA - 

Gov - Mark PTO Apr 23 → May 7th, back on 8th



EVS SERVICE AND ARCHITECTURE GROUP UPDATES
EVS Service and Architecture Group

 


DATA UPDATES
Data
  • Monthly data on Prod
  • Working on Metathesaurus updates now
    • review next week

BROWSER UPDATES

Browser
  • Both apps down on QA tier last week
    • Meta back up
    • NCITerms needed redeploy
  • ChEBI loader issue
    • OBO loader was missing qualifier
    • Will test using OWL loader and owl version of ChEBI

QA UPDATES

QA
  • March 24 data tested on Stage and Prod
  • Report Exporter 2.01 on Stage
  • Term Browser/Meta/Term Form/CTS2 testing on Prod 2

TERMINOLOGIES LIFECYCLE REPORT

Terminology Updates and Schedule 

Mark Benson TPM UpdateTickets being worked through, several closed


Vocabularies Slated for Production

  Terminology Updates and Schedule


Vocabulary Name

Local Name

Version

Arrival Date

Loaded to data-qa DB

Date to Stage

Date to Production

Vocabulary Name in LexBIG

Short Name

Version identifier

Date the vocabulary arrived for processing

Has the vocabulary been loaded to the data-qa database?

Approximate date the vocabulary version is scheduled to move to staging

Approximate date the vocabulary version is scheduled to move to production

NCI ThesaurusNCIt24.02d02/27/2024yes03/05/2403/09/24
NCIt-HGNCNCIt-HGNCFeb202402/27/2024yes03/05/2403/09/24
SwissProtSwissProtFeb202402/27/2024yes03/05/2403/09/24
CanMedCanMedFeb202403/09/24yes03/12/2403/17/24
ChEBIChEBIv23103/09/24yes03/12/2403/17/24
HGNCHGNCMar202403/09/24yes03/12/2403/17/24

QA Schedule and Status

see  QA Scheduling and Status



SECTION FOR FUNCTIONAL SYSTEM TESTING STATUS ::

Application and Version

Percentage Complete

Estimated Completion Date per Iteration

Priority Level 

Type Of Testing

Current Tier for Release (DEV, QA, Stage, Prod)

Expected Production Date

EVS REST API (v1.6)

100%

5/27/2022

High

Progression + Regression 

QA

6/6/2022

EVS Explore (v1.6)

100%

5/27/2022

High

Progression + Regression

QA

6/6/2022

EVS REST API(v1.6)

100%

6/1/2022

High

Regression

Stage

6/6/2022

EVS Explore(v1.6)

100%

6/2/2022

High

Regression

Stage

6/7/2022

EVS REST API(22.05e) - Monthly Data Deployment

100%

6/1/2022

High

Regression

Stage

6/3/2022

EVS REST API(22.05e) - Monthly Data Deployment

100%

6/3/2022

High

Regression

Production

6/3/2022

EVS REST API(v1.6)

100%

6/6/2022

High

Regression

Production

6/6/2022

EVS Explore(v1.6)

100%

6/7/2022

High

Regression

Production

6/7/2022

NCIt,NCIm,TermForm(22.05e + GO & HGNC Jun 2022 Deployment)

100%

6/3/2022

High

Regression

Stage

6/6/2022

NCIt,NCIm,TermForm(22.05e + GO & HGNC Jun 2022 Deployment)

100%

6/6/2022

High

Regression

Production

6/8/2022

EVS REST API(22.06d) - Monthly Data Deployment

100%

6/30/2022

High

Regression

Stage , Production

6/30/2022

NCIt,NCIm,TermForm(22.06d) - Monthly Data Deployment

100%

7/8/2022

High

Smoke

Stage,Production

7/8/2022

NCIt,NCIm,TermForm(22.05e + GO & HGNC Jun 2022 Deployment)

100%

6/3/2022

High

Regression

Stage

6/6/2022

NCIt,NCIm,TermForm(22.06d) - Monthly Data Deployment100%7/8/2022HighSmokeStage,Production7/8/2022
NCIt,NCIm,TermForm(ChEBI, GO & HGNC July 2022 Deployment)100%7/12/2022HighSmokeStage7/12/2022
NCIt,NCIm,TermForm(ChEBI, GO & HGNC July 2022 Deployment)100%7/13/2022HighSmokeProduction7/13/2022

EVS REST API(22.07d) - Monthly Data Deployment

100%

7/27/2022

High

Regression

Stage , Production

7/27/2022

NCIt,NCIm,TermForm(22.07d) - Monthly Data  Deployment100%8/1/2022HighSmokeStage,Production8/1/2022
NCIt,NCIm,TermForm(CanMED, GO & HGNC AUG 2022 Deployment)100%8/3/2022HighSmokeStage,Production8/3/2022

EVS REST API - 1.6.1 (Hot Fix Deployment)

100 %

8/3/2022

Highest

Progression + Regression

Stage,Production

8/4/2022


Attendees

Name

Role

Present

Remennik, LyubovNIH/NCIcheck mark button 

Safran, Tracy

NIH/NCI [C]
Ong, Kim LNIH/NCI [C]check mark button 
Lucas, Jason RNIH/NCI [C]check mark button 
Bauer, Scott  NIH/NCI [C]
Alkis, BarryNIH/NCI [C]<checked in>
Solie, ChuckNIH/NCI [C]
Kondareddy, SwathiNIH/NCI [C]check mark button
Singh, ItendraNIH/NCI [C]check mark button
Zhang, ChaoNIH/NCI [C]check mark button
Johnson, ConnieNIH/NCI [C]
Whiteman, LoriNIH/NCI [C]
Benson, MarkNIH/NCI [C]check mark button
Andrew MooreNIH/NCI [C]



JIRA Issues


Recent EVS Stats Dashboard Related Bugs and Features 

Key Summary T Created Reporter P Status
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Recent Report Exporter Related Bugs and Features 

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Key Summary T Created Reporter P Status
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Recent LexEVS Related Bugs and Features 

Key Summary T Created Reporter P Status
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Recent CTS2 Service Related Issues 

Key Summary T Created Updated Due Assignee Reporter P Status Resolution
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ASSIGNED ACTION ITEMS

DescriptionDue dateAssigneeTask appears on
09 Oct 2023Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2023.10.25
  • Benson, Mark (NIH/NCI) [C] to schedule a mtg/ discuss a possible CSS file/ENV variable for banner message and report on  
11 Oct 2023Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2023.10.25
11 Oct 2023Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2023.10.25
  • Benson, Mark (NIH/NCI) [C] to schedule a mtg/ discuss a possible CSS file/ENV variable for banner message and report on  
11 Oct 2023Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2023.10.18
11 Oct 2023Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2023.10.18
  • Benson, Mark (NIH/NCI) [C] to schedule a mtg/ discuss a possible CSS file/ENV variable for banner message and report on  
11 Oct 2023Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2023.10.11
  • Benson, Mark (NIH/NCI) [C] to schedule a mtg/ discuss a possible CSS file/ENV variable for banner message and report on  
11 Oct 2023Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2023.10.04
Benson, Mark (NIH/NCI) [C]LexEVS Meeting Minutes - 2024.09.11
  • Get the Report ready and submitted this week
LexEVS Meeting Minutes - 2024.09.04
  • Mark to follow up on ticket status/ subproject structure
LexEVS Meeting Minutes - 2024.09.04
  • Mark to follow up on ticket status/ subproject structure
LexEVS Meeting Minutes - 2024.08.28
  • Mark to follow up on ticket status/ subproject structure
LexEVS Meeting Minutes - 2024.08.21
  • Mark to follow up on ticket status/ subproject structure
LexEVS Meeting Minutes - 2024.08.14
  • Tracy to ping for status
LexEVS Meeting Minutes - 2024.08.14
  • Tracy to send invite to systems to discuss migration in this meeting
LexEVS Meeting Minutes - 2024.07.17
  • Temporarily block Singapore traffic
LexEVS Meeting Minutes - 2024.06.05
  • Tracy to request shut down of instance to save resources
LexEVS Meeting Minutes - 2024.06.05
  • Temporarily block Singapore traffic
LexEVS Meeting Minutes - 2024.05.29
  • Tracy to request shut down
LexEVS Meeting Minutes - 2024.05.29
  • Check status of termform and Tomcat9
LexEVS Meeting Minutes - 2024.05.15



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