***This meeting was cancelled***
Date
Attendees21
| Committee Member | Present | Absent |
|---|---|---|
| X | ||
| X | ||
| X | ||
| X | ||
| Elaine Ostrander | X | |
| Deborah Knapp | X | |
| Jeff Trent | X | |
| Dawn Duval | X | |
| Amy Leblanc | X | |
| Heather Gardner | X | |
| Cheryl London | X | |
| Christina Mazcko | X | |
| Paula Jacobs | X | |
| Renee Chambers | X | |
| Shaying Zhao | X | |
| William Hendricks | X | |
| Sunetra Das | X |
Outstanding Action Items
- Cheryl London will take the lead on compiling and reconciling references using EndNote
- Toby to reach out to Connie about extending invite to new PRECINCT members.
Agenda
| Agenda Item | Who | Notes |
|---|---|---|
| BPSC Review Article: Tools & Resources for the Canine Genomic Landscape | Group Discussion |
Section | Author(s) |
Intro | Dawn Duval, Cheryl London, Heather Gardner |
CanFam Genomes: Overview | Elaine Ostrander, Gina Kuffel |
CanFam Genomes: Challenges | Elaine Ostrander, Gina Kuffel |
Data Repositories | Gina Kuffel |
Cloud Resources | Gina Kuffel |
Available Tools: Standard Pipelines | Shaying Zhao |
Available Tools: MHC genotyping | Shaying Zhao |
Available Tools: Breed Prediction Pipeline | Shaying Zhao |
Emerging Technologies & Resources: Single Cell | Debbie Knapp, Cheryl London, Heather Gardner |
Emerging Technologies & Resources: Spatial Transcriptomics | Debbie Knapp, Cheryl London, Heather Gardner |
Emerging Technologies & Resources: nCounter Assay | Debbie Knapp, Cheryl London, Heather Gardner |
Emerging Technologies & Resources: Dependency Mapping | Debbie Knapp, Cheryl London, Heather Gardner |
Emerging Technologies & Resources: Liquid Biopsy | Debbie Knapp, Cheryl London, Heather Gardner |
Supplementary Materials: KPR de novo assembler and genotyper | Shaying Zhao |
Supplementary Materials: Breed prediction and validation pipeline | Shaying Zhao |
Meeting Minutes (Not Verbatim)
CL - Title for the paper: "Leading the Pack; Best Practices in Comparative Canine Cancer Genomics: Best Practices in Comparative Canine Cancer Genomics to Inform Human Oncology"
Action items
- Cheryl London to write abstract and also update the paper to include the new
GeoMx® Canine Cancer Atlas
