NIH | National Cancer Institute | NCI Wiki  


Wright, Larry NIH/NCI  x
Fragoso, Gilberto NIH/NCI     

De Coronado, Sherri    


Safran, Tracy

Ong, Kim L
Lucas, Jason R
Bauer, Scott  Mayox
Stancl, Craig
Endle,  CoryMayox
Sharma, DeepakMayo 
Wynne, Robert    NIH/NCI [C]x
Tran, Tin    NIH/NCI [C] x
Carlsen, Brian NIH/NCI [C]x
Wong, Joanne NIH/NCI [C] 

Kuntipuram, Kumar


Action Items

AssignedDescriptionDate IdentifiedDue DateDate CompletedStatus

Close issue 

  LEXEVS-1516 - Getting issue details... STATUS

2016.02.092016.04.10 Open

Create JIRA issue to update CTS2 service to use Apache Commons Collections Version 3.2.1 (security issue)

2016.03.092016.03.30 Open
CraigCreate JIRA issue to remove caCore legacy code2016.04.202016.04.30 Open
CoryUpdate wiki to describe what DBs are supported/tested going forward2016.04.272016.04.30 Open

Set up an ARC meeting for LexEVS 6.4

2016.06.292016.07.09 Open


  • Sprint 33
  • On going Support
  • Sprint 33
  • On going Support
  • Out of office
  • Sprint 33
  • Agile Admin


Sprint Status


Current Sprint  Sprint 33 (June 23, 2016 – July 6, 2016)

LexEVS S13-500 Agile Development - Sprint Status#SprintStatus-Sprint33
  • Cory built and delivered artifacts for RC.1
  • Scott is working on OWL2 Loader issues
  • Cory is working on HL7 Loader issues

Dev - RC.1

  • Status of Deployment and Verification

This deployment will be done through the PTE and Anthill Pro process.

TODO: Mayo team needs to set up an ARC meeting for LexEVS 6.4.

  • There are questions about the new lucene indexes and running LexEVS 6.3 in parallel with LexEVS 6.4. We will also need separate URLs for LexEVS 6.3 and LexEVS 6.4.
  • The Mayo team will need to verify/update the LexEVS 6.4 ARC document.
  • The Mayo team will then ask Sarah Elkins on the process to request an ARC meeting.

NCI team will run user acceptance tests (from Tin) against the LexEVS API. NCI doesn't need any additional resources from the Mayo team at this time.

After LexEVS is deployed, Tin will update the URLs from his test suite to hit the DEV deployment and test his scripts.

NCI will test LexEVS 6.3 and LexEVS 6.4 side by side to make sure they both work together.

Planning for QA deployment and beyond

This deployment will be done through the PTE and Anthill Pro process.

OWL2 Loaders - planned time with Gilberto

We have time set up for the next several Fridays (Gilberto, Rob, Tracy, Scott, Deepak, and Cory) to review OWL2 loader changes.

There are several other cardinality use cases that are not in scope for this issue. They will need to be addressed.

These issues will be discussed at the meeting set up during the next several Fridays.

We will also need to discuss how OWL fits into LexEVS in the future.

HL7 Loader issue - create issue for the flipped internal code and entity code.

The internal code and the entity code were reversed during the HL7 MIF load. These will need to be swapped to fix the issue.

LexEVS External Users

  • Updates - Javadocs issue - upper and lower case mismatch on linux

The javadocs are working as designed.

When the javadocs are created, the filename convention is to be lowercase. Any camel case filenames will therefore break.

One possible solution is to create a specialized doclet to create camel case file names/paths.

A couple other possible work arounds may be to do the following:

  • Place a note that this doesn't work on Linux. This note would be placed where we post the javadocs.
  • Host them on the wiki
Rob noted that getIsPreffered() on the presentation is returning null for Thesaurus

The return type is a Boolean type, which can return a null.

If the property name is the preferred name, Rob thought it would use that property.

Tracy suggested that the Thesaurus should have a preferred name.

Rob will create a JIRA issue for this.

  • Kim created this TreeServer issue:
The Mayo team will investigate this issue next sprint.
Team Absences

Mayo Team

  • Craig - June 30th, July 1st, July 4th
  • Cory - July 4th
  • Scott - July 4th
  • Deepak - July 4th

JIRA Issues

Recent LexEVS Related Bugs and Features (within last week)

Key Summary T Created Reporter P Status Affected Version/s Fix Version/s

Recent CTS2 Service Related Issues (within last week)

Key Summary T Created Updated Due Assignee Reporter P Status Resolution

6.4 LexEVS Related Issues

Key Summary T Created Updated Due Assignee Reporter P Status Resolution

6.4 CTS2 Service Related Issues

Key Summary T Created Updated Due Assignee Reporter P Status Resolution

Project Plan Changes

#DescriptionDue DateResourcesNotesRisksMitigation

 Planned Activities

Area of InterestDetails

Risks, Issues, Dependencies


Opened DateDue DateDescriptionLikelihood (H, M, L)ImpactAssignedStatusMitigation Strategy


 #Opened DateDescriptionImpactAssignedStatus


Opened DateDescriptionAssigned


Action Item Backlog

 #AssignedDescriptionDate IdentifiedDue DateDate CompletedStatus
64ScottTo follow up on URI's on OWL2 with Harold.   on hold
164CoryCory to add implementation to CTS2 implementations page.2014.04.30  on hold
197ScottDo a gap analysis on what the URI_Resolver logs and what NCI would like to know from these logs2014.6.18  on hold
200Larry/SherryQuery current LexEVS users about use of SOAP, REST or QBE services in the legacy caCORE api's2014.6.18  on hold
207CoryWrite issue against CTS2 OMG regarding the ability to return INACTIVE concepts only.2014.07.30  on hold
210Larry/GilbertoDetermine if there is a need to meet with the CTRP2014.07.30  on hold
212LarryInclude LexGrid XML Export as part of the 5.1 retirement notice. 2014.07.30  

on hold

224ScottURI Resolver - Provide overview of how to access the URI Resolver2014.09.03  

on hold

225ScottURI Resolver - Look at TLAMP and VSAC service to determine usage of URI Resolver2014.09.03  on hold
244CraigPlan meeting with Tracy to discuss collaborative LexEVS development process2014.12.03  on hold
281ScottTry to replicate what CTRP did to break our service (retrieve a tree through CTS2).2015.03.25  on hold
282Mayo TeamLook into implementing graph node in CTS2 for the path to root method (and path to leaf).2015.03.25  on hold




  • No labels