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Date

Attendees

NameAttended
Jayashree Kalpathy-Cramerno
Ed Heltonyes
Ulli Wagneryes
Carolyn Klingeryes
Samarth Nandekaryes

Goals

  • Status Update for Medici Helpdesk

Currently supported challenges

Name of ChallengeOrganization / MeetingMedici instance
used

Release
Training data

Release
Test data
Number of
Participants
Closing DateWill the challenge remain open?Comments
ISBI Lung Nodule ChallengeInternational Symposium on Biomedical Imaging January 8, 2018March 5, 2018107 individuals or teamsMarch 19, 2018yesCompleted move to completed list. Challenges has been closed to the users but is still open to organizers.
Pediatric Bone Age ChallengeRadiological Society of North America August 5, 2017October 7, 201739 individuals or teamsOctober 17, 2018  
Pancreatic Cancer ChallengeMICCAI 2018http://miccai.cloudapp.netMay 16,2018 74 Yes 

Combined Radiology and Pathology Classification

MICCAI 2018http://miccai.cloudapp.netJune 12,2018 49 Yes 

Digital Pathology: Segmentation of Nuclei in Images

MICCAI 2018http://miccai.cloudapp.netJune 12,2018 47 Yes 

Radiomics Stratifiers in Oropharynx Cancer

MICCAI 2018http://miccai.cloudapp.netJune 12,2018 12 Yes 
  • Discussion items

TimeItemWhoNotes
 Action Items see below
 Monthly status reports 

Update April report

Link to meeting notes

 Invoices 

Invoice seems to have been rejected because Samarth was not listed on the contract.

 Issue management 

has been deployed for new competitions

Carolyn will amend documentation

Samarth to send screenshots of issue submission page and issue tracker page

One organizer of a challenge requested to limit the number of submissions for the TEST phase to 5. Change will be implemented.

 

 Contract mod MGH to  request contract mod, JKC only key personnel. - DONE, Ulli to check with contracting office if formal contract modification is being issued
 New competitions Three new instances have been set up.The need to be added to the list of supported challenges - DONE
 Incoming Help desk requests 

will be described in status report

 Supported Challenges see new table
 Use of ePad and caMicroscope Use of ePad depends on the challenge topic e.g. ISBI Lung challenge set out to establish a value for malignancy probability for each subject. The result is a number and not a marked up image. Therefore, the submission in in form of a CSV file.

Action items

Add pancreatic cancer challenge to the list of supported challenges @Samarth

Inform Carolyn to work with Samarth to amend help to issue tracking and submission Wagner, Ulrike (NIH/NCI) [C]

Investigate on how to give the user access to the help documentation on the NCI wiki Unknown User (nandekarsam)