Date
Attendees
| Name | Attended |
|---|---|
| Jayashree Kalpathy-Cramer | |
| Ulli Wagner | yes |
| Carolyn Klinger | yes |
| Benjamin Bearce | yes |
Goals
- Status Update for Medici Helpdesk
Currently supported challenges
| Name of Challenge | Organization / Meeting | Medici instance used | Release | Release Test data | Number of Participants | Closing Date | Will the challengeremainopen? | Comments |
|---|---|---|---|---|---|---|---|---|
| SPIE | SPIE Organizers | http://spiechallenges.cloudapp.net/competitions/14 | October 15,2018 | December 1,2018 | 428 individuals or teams | December 20,2018 | Yes | Challenge will remain open; without end date for now |
AAPM Lung Challenge Computed tomography ventilation imaging evaluation 2019 (CTVIE19) | AAPM | http://aapmchallenges.cloudapp.net/competitions/35 | April 5,2019 | April 5,2019 | 56 individuals or teams | May 31,2019 | Yes | Conversation with organizer ongoing. Organizer processes data on his end; use of Medici somewhat limited User can no longer submit; data is being evaluated |
AAPM Head/Neck Challenge AAPM RT-MAC Challenge | AAPM | http://aapmchallenges.cloudapp.net/competitions/34 | April 16, 2019 | Pre-AAPM June 7, 2019 AAPM Live Challenge July 15, 2019 | 58 individuals or teams | See description of challenge for details / phases | Competition to start on April 15. | |
| MICCAI Brain Tumor challenge | MICCAI | June | Test phase has ended on 9/18/2019. | Max 5 submissions per account (can be a team or an individual) | Competition was officially accepted for the MICCAI conference. Top participants will go to MICCAI. | Tahsin Kurc has identified the top entries. NIH team will get them soon. Top 5 have been identified. NCI team is running the same dockers. | ||
| QIN Breast Challenge | Paul Kinahan University of Washington = challenge organizer Awaiting responses from him to be able to setup page/competition | Release dates currently pending from the organizers. Organized with Keyvan Farahani |
Potential challenges:
| Name of Challenge | Organization / Meeting | Medici instance used | Release | Release Test data | Number of Participants | Closing Date | Will the challengeremainopen? | Comments |
|---|---|---|---|---|---|---|---|---|
| MRI deidentification for NF event | Robert Allaway from Sage Bionetworks and Wenli Cai from MGH. | na | na | na | na | na | na | A Hackathon for the NF Conference. The hackathon is a competition to NF volumetric image analysis, which is a three days event for participants to compete for the solutions to some clinical challenges to NF imaging. |
Discussion items
| Time | Item | Who | Notes |
|---|---|---|---|
| Action Items | None | ||
| Monthly status reports | September report is due on October 10, 2019 | ||
| Contract status |
| ||
| New challenges | see list above | ||
| Issues | |||
| Documentation | |||
| Upcoming meetings | 10/3 or 10/17 - demo of how a challenge submission as docker container is run and evaluated. Ben will take screenshots while running one challenge submission. | ||
| Invoices |
| ||
| Incoming help desk requests | |||
| ePad and caMicroscope integration | Example sites have been stood up but it contains an old version of Codalab |
Action items
- Review documentation Unknown User (117153655167770452852)
- Send information regarding needed documentation updates to Klinger, Carolyn (NIH/NCI) [C] Unknown User (117153655167770452852)
- Integrate link to Medici helpdesk / decide if link to Codalab help should be maintained in addition to the link to the NCI wiki Unknown User (117153655167770452852)
- MICCAI LIver challenge - talk to Keyvan about hosting arrangements Wagner, Ulrike (NIH/NCI) [C]
