About Files for a TC1 Model

The Generating Predictions page describes how to generate predictions from a model asset collection (and optionally evaluate the model).

• When generating predictions from a TC1 model, you can select one of the following file types as an input file:
  • A GDC manifest file (such as TXT).
  • An FPKM-UQ file (TXT or CSV).
• When evaluating the model, you can select a CSV outcome file. Make sure the number of rows of data in the outcome file matches the number of rows of data in the input file.

The following attachments provide examples:

For more information on the file formats, refer to the following pages:

• https://docs.gdc.cancer.gov/Encyclopedia/pages/Manifest_File/
• https://docs.gdc.cancer.gov/Encyclopedia/pages/HTSeq-FPKM-UQ/