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  • /usr/local/protegeqa/NCIThesaurusGroup/Protege.Server-x.y.z
  • /usr/local/protegeqa/NCIThesaurusGroup/Protege.Client-x.y.z
  • /usr/local/protegeqa/NCIThesaurusGroup/Explanation.Server-x.y.z
  • Wiki Markup
    /app/protegeqa/data/\[EVS:PROTEGE INSTANCE\]
Dev, QA, Stage
  • Wiki Markup
    usr/local/protege/Protege_x.x.x/\[EVS:PROTEGE INSTANCE\]/Protege.Server-x.y.z
  • Wiki Markup
    usr/local/protege/Protege_x.x.x/\[EVS:PROTEGE INSTANCE\]/Protege.Client-x.y.z
  • Wiki Markup
    usr/local/protege/Protege_x.x.x/\[EVS:PROTEGE INSTANCE\]/Explanation.Server-x.y.z

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  • Start explanation server
    • From    /usr/local/protegeqa/NCIThesaurusGroup/Explanation.Server-x.y.z
    • Run with option to periodically save the reasoner state at a desired time frame:     ./start_explanation_server.sh --port 8092 --protege-standalone /path/to/database/project/  --persistance <numeric time value>
    • Run w/out checking for any changes in ontology:  Wiki MarkupRun&nbsp;&nbsp;&nbsp;&nbsp; ./start_explanation_server.sh \--p port 8092 \ --url jdbc:mysql://cbiows501.nci.nih.gov:3625/NCIt_Demo \-t Thesaurus_Baseline \-U protege \-P \[obtain password from system administrator\]protege-standalone /path/to/database/project/  --no-ontology-sync
  • Restart explanation server
    • From    /usr/local/protegeqa/NCIThesaurusGroup/Explanation.Server-x.y.z
    • Run     Run with option to restore to previous saved state of reasoner, as well as to check for any recent changes in the ontology from the previous saved state:     ./restart_explanation_server.sh --restore --persistance
  • Verifying explanation servers is starting up correctly
    • From    /usr/local/protegeqa/NCIThesaurusGroup/Explanation.Server-x.y.z
    • Run     tail -f nohup.out

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