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A: When exporting an owl file, rename the project and not the owl file by itself.  When renaming the project, your owl export will follow the same naming convention used.

Q: I've started a new project and am trying to enable the Changes tab, but am getting a red box and error similar to 'ncit.annotation_thesaurus doesn't exist'

A: This is due to a hard-coding where the application will attempt to find a project file named annotation_PROJECTNAME.pprj.  Rename this project file if it exists so Protege can create a new one and is no longer trying to reference the old file.

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