NIH | National Cancer Institute | NCI Wiki  

Error rendering macro 'rw-search'

null

Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

...

The following table lists and describes each field. Asterisks indicate a required information. 

General Information Characterization FieldsDefinition

Sample Name*

The name assigned to the sample.

Point of Contact*

The site that is the source of the sample. Click View Details for more information. Click Edit to edit current information. Click Add to add another point of contact.

Keywords

Keyword(s) the submitter selected to associate with the selected sample.

Access to the Sample

For more information, see Sharing a Sample with a User or Group or Making the Sample Public.

Include Page
Adding access include
Adding access include

Data Availability Metrics

For more information see Generating ata Availability Metrics.

Click Update at the bottom of the page when you are done. To disregard the changes, click Reset.

Return to top of page

Anchor
SharingSample
SharingSample
Sharing a Sample with a User or Group

Include Page
Accessing
Accessing

...

Include Page
Make It Public
Make It Public

Return to top of page

Anchor
Metrics
Metrics
Generating Data Availability Metrics

Once you successfully save a sample to the database, you or the data curator can generate a data availability metrics table for the sample. The metrics identify the percentage of data available for the sample and displays a metrics of submitted data against caNanoLab-supported data and data supported in the MinChar standard.

Tip
titleCurators and batch metrics

A data curator can generate data availablility metrics in batch mode for samples as well.

Reviewing the Metrics for an Individual Sample

To review a data availability metrics for an individual sample

  1. Perform a sample search.
  2. From the sample search results, if data availability is generated for a sample, click the link in the Data Availability column.

    Data Availability Metrics link in Sample Search Results

    You can review the entire metrics, and click Close when you are done.

Re/Generating a Metrics for an Individual Sample

To delete or regenerate availability metrics for a sample

...

  1. From the sample search results, click Edit in the Actions column.
  2. Update Sample opens and the Data Availability Metrics section is at the bottom.
    Data Metrics Availability section of Update Sample
    1. If there is no metrics generated for the sample, click Generate.
    2. If a metrics was previously generated, click Edit as shown in the screen above.
    The metrics table displays high-level medidata for minimal care.
    caNanoLab Data Metrics at the top
  3. Using examples, the following table describes the percentages at the top of the metrics.

    Percentages at the Top of the MetricsDescription
    caNanoLab Availability Score: 23.0% (7 out of 30)Indicates that the sample has 23% of the total possible number of caNanoLab attributes filled in or 7 out of 30.
    MINChar Availability Score: 11.0% (1 out of 9)Indicates that the sample has 11% ofthe total possible number of MinChar attributes filled in or 1 out of 9.
  4. The following table describes each column on the metrics.

    Columns in the MetricsDescription
    caNanoLabLists all data elements that can be added to the sample in caNanoLab.

    MinChar

    Lists the minimum nanoparticle characterization standards as established by MinChar Initiatives.

    [Name of sample]includes check marks where data element annotations are added to the sample.
  5. The following buttons are at the bottom of the metrics.
    caNanoLab Data Metrics Buttons
    1. Click Delete to delete the metrics for this sample.
    2. Click Close to return to Update Sample without changing the metrics.
    3. Click Regenerate to regenerate the metrics.

...