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1. With the appropriate study open, click Integrative Genomics Viewer on the left sidebar. This opens the View IGV Selector page, shown in the following figure.
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2. In the drop-down list, select the Gene Expression Platform for the data you want to view.
3. Select the Copy Number Platform ID.
4. The Annotations - Default panel displays existing annotation fields for the gene expression data in the open study. Select those fields you want to view when you open the IGV. Use the buttons for convenience if you want to Select All or Unselect All, when all are checked.
5. Click View to see the data in the Integrative Genomic Viewer. caIntegrator creates IGV files of the data.
6. After the files are created, click the Launch Integrative Viewer hypertext link that appears.
7. Continue with Step 3 in #Method 1 IGV.

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1. With the appropriate study open, click Heat Map Viewer on the left sidebar. This opens the View Heat Map Viewer Selector page, shown in the following figure.
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2. Select the appropriate Copy Number Platform in the drop down list.
3. The Annotations - Default panel displays existing annotation fields for the gene expression data in the open study. Select one or more annotations in the annotation list. For convenience, you can use the Select All or Unselect All buttons.
4. Click View to view the data you select in Heat Map Viewer. caIntegrator creates Heat Map Viewer files of the data.
5. After the files are created, click the Launch Heat Map Viewer hypertext link that appears.
6. Continue with Step 3 in #Method 1 HMV.

   Info
   title Note
   For interpretation of the results and using HMV features, see the help files opened from HMV.

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