NIH | National Cancer Institute | NCI Wiki  

Error rendering macro 'rw-search'

null

Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.
Comment: updated text and numbers, NCIm split, aligned table formats
Wiki Markup
{scrollbar:icons=false}

h1. {page-info:title}

{multi-excerpt:name=SharedTerminologyDevelopment}Since 1997, EVS has worked with many partners to build shared content and services, so that information can be effectively exchanged, interpreted and analyzed while minimizing overall effort and cost.  Much of this content has been created and published using NCI Thesaurus and NCI Metathesaurus, as outlined below and described in more detail in the individual user profiles later, where other shared development efforts are also described.

{toc:minLevel=2}

h2. NCI Thesaurus (NCIt)

NCI Thesaurus (NCIt) is NCI's core reference terminology. Over the last 10 years, it has also been adopted by FDA, CDISC, NCPDP and other partners as a shared standards development and coding environment, allowing participants to compare and harmonize with each other's content while taking advantage of full-text definitions, codes, and other features.

About 40,000 out of the nearlyover 10090,000 current NCIt concepts have terms from both EVS and from one or more of these other sources. The chart below gives a detailed breakdown of the lastmain availableareas detailedof breakdown,overlapping fortagged June 2010content.  Note that some partners have used NCI terms rather than tagging their own, so these figures understate the true extent of cross-source sharing.

{color:#002060}{*}NCIt concepts with terms from tagged outside sources (11.09d: September 2011)*{color}
!Shared_Development.PNG|border=1!

{color:#002060}{*}NCIt concepts with tagged synonyms from each outside source (11.09d: September 2011)*{color}

|| NCIt SourceConcepts || NCIt ConceptsSource ||
| BIOCARTA | {align:right} 335 {align} |
| BRIDGBIOCARTA |
| {align:right} 1,139 {align} |
| CADSRBRIDG |
| {align:right} 27 {align} |
| CDCCADSR |
| {align:right} 919 {align} |
| CDISCCDC |
| {align:right} 5,633 {align} |
| CRCHCDISC |
| {align:right} 424 {align} |
| CTCAECRCH |
| {align:right} 6,368 {align} |
| CTRMCTCAE |
| {align:right} 4,421 {align} |
| DCPCTRM |
| {align:right} 902 {align} |
| DICOMDCP |
| {align:right} 114 {align} |
| DTPDICOM |
| {align:right} 697 {align} |
| FDADTP |
| {align:right} 15,772 {align} |
| HL7FDA |
| {align:right} 125 {align} |
| ICHHL7 |
| {align:right} 215 {align} |
| JAXICH |
| {align:right} 156 {align} | JAX |
| KEGG | {align:right} 255 {align} |
| NCICBKEGG |
| {align:right} 4 {align} |
| NCI-GLOSSNCICB |
| {align:right} 5,157 {align} |
| NCPDPNCI-GLOSS |
| {align:right} 515 {align} |
| NICHDNCPDP |
| {align:right} 886 {align} |
| PIDNICHD |
| {align:right} 169 {align} |
| RENIPID |
| {align:right} 311 {align} |
| SEERRENI |
| {align:right} 62 {align} |
| UCUMSEER |
| {align:right} 287 {align} |
| ZFinUCUM |
| {align:right} 25 {align} |
 ZFin |

h2. NCI Metathesaurus (NCIm)

NCI Metathesaurus (NCIm) was started in the late 1990s to gather up, translate between, and publish the many terminologies used by NCI, including some created in part or whole within NCI.  Development of NCI Thesaurus started within NCIm as NewPDQ, an effort to extend and restructure the PDQ Terminology long used to code cancer clinical trial, research and public information resources.  NCIm continues to provide a vital environment for EVS collaboration with NCI and other partners to develop, map and publish terminologies of shared interest, and responds to the requirements of a broad range of stakeholders within the cancer research and biomedical community.
.  NCIt tagged content from outside sources is imported into NCIm retaining those source tags; these sources are grouped separately below.

\[details on NCIm collaborations and concept/term statistics pending\]{multi-excerpt}

{color:#002060}{*}NCIm sources and the number of concepts to which each contributes (201105: May 2011)*{color}

|| Number ofNCIm concepts || Source Label ||  Source Name  ||
|| NCIt-derived 15870||  AOD   |  Alcohol and Other Drug Thesaurus, 2000  |
|  278  |  AOT   |  Authorized Osteopathic Thesaurus, 2003    ||   ||
| {align:right} 334 {align} |  BioC   |  BioCarta online maps of molecular pathways, adapted for NCI use, 1105E  |
|  1139{align:right} 1,139 {align} |  BRIDG   |  Biomedical Research Integrated Domain Group Model, 1105E  |
| {align:right} 921 {align} 13255| CDC CBO| U.S. Centers |for Disease ClinicalControl Bioinformaticsand OntologyPrevention, 2011_02 1105E |
| {align:right}  11045,636 {align} | CDISC CCS| Clinical Data |Interchange Standards Clinical Classifications SoftwareConsortium, 2005 1105E |
| {align:right} 921406 {align} |  CDC  CRCH | Cancer U.S. Centers for Disease Control and PreventionResearch Center of Hawaii Nutrition Terminology, 1105E  |
| {align:right}  56366,368 {align} | CTCAE CDISC   | Common ClinicalTerminology DataCriteria Interchangefor StandardsAdverse ConsortiumEvents, 1105E  |
| {align:right} 0903 {align} | DCP COH| NCI Division |of Cancer CityPrevention of HopeProgram, 1105E  |
| {align:right} 3073114 {align} | DICOM COSTAR| Digital Imaging |Communications in COSTARMedicine, 1105E 1989-1995  |
| {align:right} 406693 {align} |  CRCH  DTP | NCI CancerDevelopmental Research Center of Hawaii Nutrition TerminologyTherapeutics Program, 1105E  |
|  16572 {align:right} 15,471 {align} | FDA CSP| U.S. Food |and Drug CRISP ThesaurusAdministration, 20061105E  |
| {align:right} 3836215 {align} | ICH CST| International Conference |on  COSTARTHarmonization, 1995 1105E |
| {align:right} 6368156 {align} | JAX CTCAE| Jackson Laboratories |  CommonMouse Terminology, Criteriaadapted for AdverseNCI Eventsuse, 1105E  |
| {align:right} 345244 {align} | KEGG CTEP| KEGG  |  Cancer Therapy Evaluation Program, 2004 Pathway Database, 1105E |
|  903 {align:right} 5,084 {align} |  DCP  NCI-GLOSS |  NCI DivisionDictionary of Cancer Prevention ProgramTerms, 1105E  |
| {align:right} 114125 {align} | NCI-HL7 DICOM| NCI Health |  Digital Imaging Communications in MedicineLevel 7, 1105E  |
| {align:right} 693514 {align} | NCPDP DTP| National Council |for Prescription NCI Developmental Therapeutics ProgramDrug Programs, 1105E  |
| {align:right} 7278715 {align} | NICHD DXP| National Institute |of Child DXplain,Health 1994and  |Human Development, 1105E |
| {align:right} 15471169 {align} | PID FDA| National Cancer |Institute Nature U.S. Food and Drug AdministrationPathway Interaction Database, 1105E  |
| {align:right} 77923310 {align} |  FMA  RENI | Registry FoundationalNomenclature ModelInformation ofSystem, Anatomy Ontology, 2_0  |
|  54439 1105E |
| {align:right} 287 {align} | UCUM GO| Unified Code |for Units Geneof OntologyMeasure, 2010_04_01 1105E |
| {align:right} 560225 {align} |  HCPCS  ZFIN | Zebrafish HealthcareModel CommonOrganism ProcedureDatabase, Coding System, 2010 1105E |
|| Other |
|   7483||   ||
| {align:right}  HL7V3.0  15,870 {align} | AOD | Alcohol HL7and VocabularyOther VersionDrug 3.0Thesaurus, 2006_05 2000 |
| {align:right} 29335  278 {align} |  HUGO  AOT | Authorized HUGOOsteopathic Gene NomenclatureThesaurus, 2010_05 2003 |
|  11532 {align:right} 13,255 {align} | CBO ICD10| Clinical Bioinformatics |  ICD10Ontology, 1998 2011_02 |
|  1004 {align:right} 1,104 {align} | CCS ICD10AE| Clinical Classifications |  ICD10Software, American English Equivalents, 1998 2005 |
|  97631 {align:right} 3,073 {align} | COSTAR ICD10CM| COSTAR, 1989-1995 |
| {align:right}  International Classification of Diseases, 10th Edition, Clinical Modification, 2010_03  |
|  181116  |  ICD10PCS   |  ICD-10-PCS, 2009 16,572 {align} | CSP | CRISP Thesaurus, 2006 |
| {align:right} 3,836 {align} | CST | COSTART, 1995 |
| {align:right} 20779345 {align} |  ICD9CM  CTEP | Cancer InternationalTherapy ClassificationEvaluation of DiseasesProgram, Ninth Revision, Clinical Modification, 2011 2004 |
| {align:right} 7,278 {align} | DXP | DXplain, 1994 |
|  2466 {align:right} 77,923 {align} |  ICDO  FMA | Foundational International ClassificationModel of DiseasesAnatomy for OncologyOntology, 3rd Edition, 2000  2_0 |
|  215 {align:right} 54,439 {align} |  ICH  GO |  International Conference on Harmonization, 1105E Gene Ontology, 2010_04_01 |
|  748 {align:right} 5,602 {align} |  ICPC  HCPCS | Healthcare InternationalCommon ClassificationProcedure ofCoding Primary CareSystem, 19932010  |
|  37923 {align:right} 7,483 {align} |  ICPC2ICD10ENG  HL7V3.0 | HL7 ICPC2Vocabulary - ICD10 Thesaurus, 200412 Version 3.0, 2006_05 |
|  156 {align:right} 29,335 {align} |  JAX  HUGO | HUGO JacksonGene Laboratories Mouse Terminology, adapted for NCI use, 1105E Nomenclature, 2010_05 |
| {align:right} 11,532 {align} | ICD10 | ICD10, 1998 |
|  244 {align:right} 1,004 {align} |  KEGG  ICD10AE | ICD10, KEGGAmerican PathwayEnglish DatabaseEquivalents, 1105E 1998 |
|  80206 {align:right} 97,631 {align} | ICD10CM LNC| International Classification |of Diseases, Logical10th ObservationEdition, Identifier Names and Codes, 232 Clinical Modification, 2010_03 |
|  41 {align:right} 181,116 {align} |  MCM  ICD10PCS |  McMaster University Epidemiology Terms, 1992 ICD-10-PCS, 2009 |
|  331 {align:right} 20,779 {align} |  MDBCAC  ICD9CM | International MitelmanClassification Databaseof ofDiseases, ChromosomeNinth AberrationsRevision, inClinical CancerModification, 2005_12 2011 |
|  47210 {align:right} 2,466 {align} | ICDO MDR| International Classification |  Medical Dictionaryof Diseases for RegulatoryOncology, Activities3rd TerminologyEdition, 14.0 2000 |
| {align:right} 1897748 {align} | ICPC MEDLINEPLUS| International Classification |of Primary MedlinePlus Health TopicsCare, 20080614 1993 |
|  900 {align:right} 37,923 {align} | ICPC2ICD10ENG MGED| ICPC2 - |  MGED OntologyICD10 Thesaurus, 131200412  |
|  310485 {align:right} 80,206 {align} | LNC MSH| Logical Observation |Identifier Names Medicaland Subject HeadingsCodes, 2011_2010_08_30 232 |
| {align:right} 8513841 {align} | MCM MTH| McMaster University |  UMLS MetathesaurusEpidemiology Terms, 2010AB 1992 |
|  19880 {align:right} 331 {align} |  MTHFDA  MDBCAC | Mitelman MetathesaurusDatabase FDAof NationalChromosome DrugAberrations Codein DirectoryCancer, 2010_08_02 2005_12 |
|  337 {align:right} 47,210 {align} | MDR MTHHH| Medical Dictionary |for Regulatory Metathesaurus HCPCS Hierarchical Terms, 2010 Activities Terminology, 14.0 |
|  16081 {align:right} 1,897 {align} |  MTHICD9  MEDLINEPLUS | MedlinePlus InternationalHealth ClassificationTopics, of Diseases, Ninth Revision, Clinical Modification, Metathesaurus additional entry terms, 2011  |
|  94  |  MTHICPC2ICD107B   |  ICPC2 - ICD10 Thesaurus, 7-bit Equivalents, 0412  |
|  76  |  MTHICPC2ICD10AE   |  ICPC2 - ICD10 Thesaurus, American English Equivalents, 0412  |
|  1633  |  MTHMST   |  Metathesaurus Version of Minimal Standard Terminology Digestive Endoscopy, 2001  |
|  12969  |  MTHSPL   |  Metathesaurus FDA Structured Product Labels, 2010_08_27  |
|  478187  |  NCBI   |  NCBI Taxonomy, 2010_04_29  |
|  85314  |  NCI   |  National Cancer Institute Thesaurus, 2011_05E  |
|  5084  |  NCI-GLOSS   |  NCI Dictionary of Cancer Terms, 1105E  |
|  125  |  NCI-HL7   |  NCI Health Level 7, 1105E  |
|  135  |  NCIMTH   |  NCI Metathesaurus  |
|  0  |  NCISEER   |  NCI SEER ICD Neoplasm Code Mappings, 1999  |
|  514  |  NCPDP   |  National Council for Prescription Drug Programs, 1105E  |
|  38863  |  NDFRT   |  National Drug File, 2010_09_07  |
|  715  |  NICHD   |  National Institute of Child Health and Human Development, 1105E  |
|  1781  |  NPO   | 20080614 |
| {align:right} 900 {align} | MGED | MGED Ontology, 131 |
| {align:right} 310,485 {align} | MSH | Medical Subject Headings, 2011_2010_08_30 |
| {align:right} 85,138 {align} | MTH | UMLS Metathesaurus, 2010AB |
| {align:right} 19,880 {align} | MTHFDA | Metathesaurus FDA National Drug Code Directory, 2010_08_02 |
| {align:right} 337 {align} | MTHHH | Metathesaurus HCPCS Hierarchical Terms, 2010 |
| {align:right} 16,081 {align} | MTHICD9 | International Classification of Diseases, Ninth Revision, Clinical Modification, Metathesaurus additional entry terms, 2011 |
| {align:right} 94 {align} | MTHICPC2ICD107B | ICPC2 - ICD10 Thesaurus, 7-bit Equivalents, 0412 |
| {align:right} 76 {align} | MTHICPC2ICD10AE | ICPC2 - ICD10 Thesaurus, American English Equivalents, 0412 |
| {align:right} 1,633 {align} | MTHMST | Metathesaurus Version of Minimal Standard Terminology Digestive Endoscopy, 2001 |
| {align:right} 12,969 {align} | MTHSPL | Metathesaurus FDA Structured Product Labels, 2010_08_27 |
| {align:right} 478,187 {align} | NCBI | NCBI Taxonomy, 2010_04_29 |
| {align:right} 85,314 {align} | NCI | National Cancer Institute Thesaurus, 2011_05E |
| {align:right} 135 {align} | NCIMTH | NCI Metathesaurus |
| {align:right} 38,863 {align} | NDFRT | National Drug File, 2010_09_07 |
| {align:right} 1,781 {align} | NPO | NPO: NanoParticle Ontology for Cancer Nanotechnology Research, 2010_10_31  |
| {align:right}  63924 63,924 {align} |  OMIM   |  Online Mendelian Inheritance in Man, 2010_04_08  |
|  9869 {align:right} 9,869 {align} |  PDQ   |  Physician Data Query, 2010_08_06  |
|  169  |  PID   |  National Cancer Institute Nature Pathway Interaction Database, 1105E  |
|  2041  |  PMA   | {align:right} 2,041 {align} | PMA | Portfolio Management Application, 2010  |
| {align:right} 268 {align} |  PNDS   |  Perioperative Nursing Data Set, 2nd edition, 2002  |
| {align:right} 940 {align} |  QMR   |  Quick Medical Reference (QMR), 1996  |
|  30033  |  RADLEX   |  RadLex, 3_33  Reference (QMR), 1996 |
|  310 {align:right} 30,033 {align} |  RENI  RADLEX |  Registry Nomenclature Information SystemRadLex, 1105E 3_33 |
|  227498 {align:right} 227,498 {align} |  RXNORM   |  RxNorm Vocabulary, 10AA_100907F  |
|  281843 {align:right} 281,843 {align} |  SNOMEDCT   |  SNOMED Clinical Terms  |
|  4808 {align:right} 4,808 {align} |  SPN   |  Standard Product Nomenclature, 2003  |
|  156  |  SRC   |  Metathesaurus Source Terminology Names  |
|  287  |  UCUM   |  Unified Code for Units of Measure, 1105E  |
| {align:right} 156 {align} | SRC | Metathesaurus Source Terminology Names |
|  13788 {align:right} 13,788 {align} |  UMD   |  UMDNS: product category thesaurus, 2010  |
|  1765 {align:right} 1,765 {align} |  USPMG   |  USP Model Guidelines, 2004  |
|  61191 {align:right} 61,191 {align} |  UWDA   |  University of Washington Digital Anatomist, 1.7.3  |
|  26546 {align:right} 26,546 {align} |  VANDF   |  Veterans Health Administration National Drug File, 2010_07_26  |
|  25  |  ZFIN   |  Zebrafish Model Organism Database, 1105E   |

{scrollbar:icons=false}