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Release: caArray 2.X

Date entered: 02/12/2009

Topics on this page include the following:

Table of Contents
minLevel2

Answer

MAGE-TAB (MicroArray Gene Expression Tabular) format files refer to simple tab-delimited, spreadsheet-based files, which can be used for annotating and communicating microarray data in a MIAME compliant fashion. MAGE-TAB specification is based on the Microarray and Gene Expression Object Model (MAGE-OM). MAGE-TAB specification and related publications provide more details on the format.

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The MAGE-TAB specification can be found at: MGED homepage.
To get started, you may generate a MAGE-TAB template file from EMBL-EBI's MAGE TAB site, or create your own IDF and SDRF files based on the Sourceforge MAGE-TAB documentation.

Be sure and review the details in Appendix A - MAGE-TAB in caArray to ensure that your MAGE-TAB files meet the specifications for compatibility with caArray.

MAGE-TAB training and demos for the caArray users are currently under the development. We will add the links here once they become available.

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