Page History

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Highlights of caIntegrator v1.3 released on 06/17/2011

• Compliance with the Section 508 of the US Rehabilitation Act.
• Compliance with NCI web application security standards.
• Support for Agilent Human Genome CGH Custom Microarray 2x415K (GPL13346_family_tdt.adf) http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GPL13346^{Image Added}

For a complete list of new features for 1.3.1 please see https://wiki.nci.nih.gov/display/caIntegrator/caIntegrator+Project+Pages^{Image Added}.

Highlights of caIntegrator v1.3 released on 06/17/2011

• Visualization capabilties for copyNumber and Expression data using The Integrative Genomics Viewer (IGV). IGV is high performance visualization tool for interactive exploration of large, integrated datasets.
• Visualization capabilties for copyNumber using NCI CGWB Heatmap viewer. Heatmap viewer is a tool for visualization of copy-number data and associated clinical annotations.
• Support for the caCGHcall grid service to process copyNumber(CGH) data using Bioconductor CGH package. CGHcall allows users to make an objective and effective classification of their aCGH data into copy number states (loss, normal, gain or amplification).
• Querying of Copy Number data by Mean Segment Values and by Calls value (Calls values available when caCGHcall service is selected).
• Capability to use supplemental file from caArray for all supported platforms.

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