Page History

caArray

2.4

2.5

TBD

Use Java RMI-based "external model" API

No data on what will change or a release date.

TBD

NBIA

4.4

4.5

10/31/10

Use caGrid data service for CQL queries and caGrid grid file transfer service.

No changes to the API for 4.5.  Version 4.5 does support secure Grid services, so we will need to implement support for secure services sometime in the future.

TBD

AIM

1.5

3.0

1/31/11

Use caGrid data service for CQL queries.  Custom serialization/deserialization client used.

3.0 will introduce new data model (better mapping of allowable values for annotations) and will require updates to client jar as well as changes to how Image Annotations are used.

TBD

GenePattern

3.2.3

TBD

TBD

caGrid analytical service used for genomic algorithms

TBD

caDNAcopy
(part of Bioconductor)

caDNAcopy 1.2
Bioconductor 1.9
(contains DNAcopy 1.8.1)

TBD

TBD

caGrid anaytical service for caDNAcopy used for copy number data during study deployment.  Deployed as part of Bioconductor.  We are examining non-functional changes to improve performance (multi-threading) and logging.

No information on planned future releases of this tool.  We do not need to adopt Bioconductor upgrades unless there are fixes to DNAcopy (which is an optional install under Bioconductor).

TBD

caBio

4.3

MAservice 1.0

TBD

REST API used for keyword or pathway based gene search

caBio functionality being replaced by MA service.  Meeting with caBio team and caIntegrator scheduled for 11/10/10 to ensure all caIntegrator requirements are met.

TBD