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Page History
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The following applications are used by caIntegrator and require some sort of dependency management. This table will track upcoming releases and any known changes or retest required for these releases. This work can then be scheduled into an upcoming caIntegrator iteration.
Application / Service | Version | Version | Next | Projected | Interface Summary / Needed caIntegrator Changes | Planned |
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caArray | 2.4 | XX | 2.5 | 7/2012 | Use Java RMI-based "external model" API | TBD |
NBIA | 4.4 | XX | 5.0 | 10/31/10 | Use caGrid data service for CQL queries and caGrid grid file transfer service. | TBD |
AIM | 1.5 | XX | 3.0 | 1/31/11 | Use caGrid data service for CQL queries. Custom serialization/deserialization client used. | TBD |
GenePattern | 3.2.3 | XX | TBD | TBD | caGrid analytical service used for genomic algorithms | TBD |
caDNAcopy | caDNAcopy 1.2 | TBD | XX | TBD | caGrid anaytical service for caDNAcopy used for copy number data during study deployment. Deployed as part of Bioconductor. We are examining non-functional changes to improve performance (multi-threading) and logging. | TBD |
caBio | 4.3 | XX | MAservice 1.0 | TBD | REST API used for keyword or pathway based gene search | TBD |
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