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Comment: Migration of unmigrated content due to installation of a new plugin
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This process will convert the currently existing database into a backup owl file stored in app/protégé/data/Protégé_xx/<PROTÉGÉ INSTANCE>.   This file can then be used to be converted back to an OWL / RDF database, creating new tables and indexes to reflect any database related code / schema changes.   The same owl file can also be used to update Dev, QA, and Stage.  

  • Advertise that the production server will be going down.

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  • Type 'ps -ef | grep rmiregistry' to retrieve the rmi regisry ID to kill.  
  • Once the ID is determined, type 'kill  kill -9 <rmi registry ID> '.
  • Open up a Protégé Client instance from production environment, and click 'Create new Project, Check the 'Create from Existing Sources' box, Select OWL / RDF  RDF database and click 'Next', Select OWL Database and click 'Next',   enter all necessary database information and click 'Finish'.   The project should appear on the GUI.
  • Click File, Convert File to Format, OWL / RDF file and convert.   This will create an OWL file using the data from the database.   Save the project as 'Thesaurus<YYMMDD>' or 'BiomedGT<YYMMDD>.   Store this owl file in app/protégé/data/Protégé_x.x/<PROTÉGÉ INSTANCE>.
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