Page History
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Product: caIntegrator
Version: 1.4.2
Date: January 2014 February 5, 2014
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- caIntegrator2 v1.0.0 -- Oct 2009
- caIntegrator2 v1.0.1 -- Jan 2010
- caIntegrator2 v1.1.0 -- Jun 2010
- caIntegrator v1.2.0 -- Sep 2010
- caIntegrator v1.3.0 -- Jun 2011
- caIntegrator v1.3.1 – Nov 2011
- caIntegrator v1.4 -- July 2012
- caIntegrator v1.4.1 – Oct 2013
- caIntegrator v1.4.2 – Jan – Feb 2014
Highlights of caIntegrator v1.4.2
This release includes enhancements to improve performance and upgrades to third-party components to improve maintainability and reduce technical risk.
Performance improvements
- [CAINT-1279] - Improve memory usage of study deployments
- [CAINT-1282] - Improve performance of the various searches within caIntegrator
- [CAINT-1283] - Improve performance of study summary and edit study pages
Component upgrades
- [CAINT-1301] - Upgrade to EhCache 2.6.6
- [CAINT-1242] - Upgrade to latest version of the Spring Framework
- [CAINT-1320] - Upgraded from Tiles 2.2.x to Tiles 3.x
- Enhancements to the BioDBNet search: Users can now search for gene pathways by gene symbol, then select the gene pathways for which the search should return genes. Users can also select whether or not searches should be case sensitive.
- caIntegrator is now able to receive data from the AIM service at Emory.
- Upgrade to Struts 2.3.15.1 to address a serious security vulnerability that allows attackers to gain administrative control of the server.
- Technology upgrades: IGV 2.1.
- Section 508 compliance improvements.
Features and Defects Addressed in this Release
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Known Issues/Defects
- caIntegrator 1.4.1 2 can only pull array data from caArray v 2.5.1 and newer.
- CAINT-1070 Attempting to Add New Genomic Data Source in IE8 produces Restricted Area error
Note: There is a workaround for this issue. After encountering the error, go to Manage Studies -> Edit Study page, and re-add the Genomic Data Source. See CAINT-1070. - There is an issue that may be seen if a user attempts to install an older version of caIntegrator after installing caIntegrator 1.4.1 2 using the Windows GUI installer. Older versions of caIntegrator use JBoss 4 in the installation whereas caIntegrator 1.4.1 2 uses JBoss 5. To avoid the issue the user must delete the .installer-caintegrator2 file before beginning the second installation. The .installer-caintegrator2 file can usually be found in a default directory such as C:\Documents and Settings\username. If this file is not removed JBoss 5 will be installed instead of JBoss 4 and the installation will fail.
- There is a known issue within the UPT that account administrators may encounter when they add new users. The UPT may erroneously indicate that the user was already created and is a duplicate. When this happens and the user is not a duplicate the new user will be create as expected and the error message can be ignored. CSM-716, New user can be created in CSM 4.2.3 successfully, but the message displayed in browser is wrong. See CSM-716.
- There is a known issue in caIntegrator: Uploading large clinical files and then annotating the data takes longer than expected - i.e. the screen goes blank for a long time between selections. See CAINT-73. This is fixed in 1.4.2 by upgrading EhCache to 2.6.6 (see CAINT-1301).
- The AIM Data Service at Emory has deprecated their caGrid service and replaced it with a newer REST-based API. Newer versions of caIntegrator will utilize this new API. See CAINT-1357.
- Large Clinical Data files take too long between annotation definition assignment. See CAINT-73There is known issue on that occurs intermittently on NCI's STAGE tier where the user gets an "Unauthorized access" during study creation (see CAINT-1334).
See the JIRA tracker for existing open defects, community requests,resolutions and feature requests: https://tracker.nci.nih.gov/browse/CAINT
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