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This guide explains how to use the administrative features of the National Biomedical Imaging Archive (NBIA).
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Administration Functions Overview
Security applies to all administration tools in NBIA. When you log into NBIA, only the administration tools for which you have been granted permissions are visible in the Admin menu. Their use is described on this page.
Creating a New NBIA User
Only an NBIA administrator can create new users for NBIA.
Before NBIA users can be created, an administrator with access to the User Authorization Tool must register the NCIA application and assign an admin administrative user to the NCIA application there. The administrator can then assign users to NBIA and roles to each user. The following table describes the role structure in NBIA.
Role | Functionality | Can Perform Operation |
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NCIA.READ | Search capability | Everything else Note: This role is applied to guest users. |
NCIA.MANAGE_VISIBILITY_STATUSPrivilege to access | Access the QC Tool | |
NCIA.VIEW_SUBMISSION_REPORTPrivilege to access Verify Submission | Access and verify a submission | |
NCIA.MANAGE_COLLECTION_DESCRIPTION | Privilege to edit Edit a collection description | |
NCIA.SUPER_CURATOR | Create, edit, and delete workflow items Review and delete saved queries Approve Privilege to approve the deletion of image series Delete a shared list | |
NCIA.DELETE_ADMIN | Privilege to execute the deletion of Delete images approved for deletion | |
NCIA.ADMIN | Use the User Authorization Tool | Use the User Authorization Tool Note: This role is also needed to access CSM UPT. |
The roles you assign allow a user to perform tasks in TCIANBIA. Additionally, an administrator can perform the following tasks:
- Assign a user right the privilege to use the QC tool for the purpose of reviewing submitted imaging data and managing visibility status for the data. See Using the Quality Control Tool.
- Verify submitted files. This includes the permission to view the image submission report which includes submission statistics and information regarding what has been received by the image repositories. See Viewing Submission Reports.
- Configure security for data submitted to TCIA. For more information, see Configuring Security for Submitted DataNBIA.
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Do not use special characters in user names. You can use special characters in passwords. |
For more information about creating new TCIA NBIA users/user groups and performing other tasks in the User Authorization Tool, see the User Authorization Tool documentation.
Using the QC Tool
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Deleting Image Series
As an administrator, you can assist in the two-tier process of deleting TCIA NBIA data. To do so, you must have been granted specific roles. For more information about the roles and the deletion processes, see NBIA Administrator's Guide 6.5.3.1Approving Image Deletions and Manually Deleting Image Series.
Approving Image Deletions
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Manually Deleting Image Series
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Viewing Submission Reports
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Accrual Report
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Image Submission Report
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Annotation Submission Report
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Editing a Collection Description
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Managing Workflow Items
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Managing Saved Queries
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Using the User Authorization Tool
NBIA role required to use this feature: NCIA.ADMIN
For more information about roles, see Creating a New NBIA User.
Administrators use the User Authorization tool to manage data access by users, user groups, protection groups, and roles.
Topics in this section include:
- NBIA Administrator's Guide 6.5.3.1Accessing the User Authorization Tool
- Managing Users
- NBIA Administrator's Guide 6.5.3.1
- NBIA Administrator's Guide 6.5.3.1
- NBIA Administrator's Guide 6.5.3.1
- Managing Protection Groups
- Managing User Groups
- Adding Protection Groups and Assigning Roles
- Resolving Errors in the User Authorization ToolNBIA Administrator's Guide 6.5.3.1
Accessing the User Authorization Tool
To access and use the User Authorization Tool, you must be an NBIA administrator.
- Log in to TCIANBIA.
- Select Admin > User Authorization Tool.
The User Authorization Tool appears, open to the User tab.
Managing Users
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Managing Protection Elements
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Managing Protection Groups
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Managing User Groups
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Adding Protection Groups and Assigning Roles
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Resolving Errors in the User Authorization Tool
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