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About this page
This page explains the operational procedure for maintaining optimal Protégé performance and managing the publication of data.
There are two aspects to Protégé operations:
Updating the Protégé application
The Protégé application is undergoing active, continual development.
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EVS has extended Protégé using the following plug-ins:
- NCI Edit tab
- NCI Workflow tab
- NCI Code Generator
- NCI Changes tab
- Chat tab
- Prompt tab
As we continue to develop these plug-ins, they need to be tested and eventually moved into the production editing environment.
Publishing Protégé data
This section discusses three aspects of publishing Protégé data:
- #Publishing to the BiomedGT Wiki
- #Publishing the NCI Thesaurus to the DTS (caCORE 3.2)
- #Publishing of NCI Thesaurus and BiomedGT to LexBIG (evsapi 4.0)
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The information about publishing to BiomedGT is provided for historical purposes. |
Publishing to the BiomedGT Wiki
This section discusses two typical scenarios for publishing to the BiomedGT Wiki from Protégé:
Publishing a single concept
In this scenario, an editor edits a concept, saves the edited concept, and clicks a Publish button to push the changed data to the Wiki.
Publishing structural changes to vocabulary
Administrators sometimes make the following administrative changes to the vocabulary:
- Add new roles
- Remove roles (rarely occurs)
- Add properties
- Modify list values
After the administrator makes structural changes, those changes are migrated to the wiki through a manual load process
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Publishing the NCI Thesaurus to the DTS (caCORE 3.2)
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Publishing of NCI Thesaurus and BiomedGT to LexBIG (evsapi 4.0)
We will use the LexBIG application to support the evsapi 4.0 and future versions. LexBIG can directly import OWL-formatted data. We will also need to implement several QA processes to support publishing to LexBIG.
Learn more about the procedure for publishing BiomedGT data to LexBIG and the DTS.