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Question: How do I add a new array platform in caIntegrator?
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Topic: caIntegrator Usage
Release: caIntegrator 1.2 and above
Date entered: March 03/23, 2011
Question
How to add a new array platform in caIntegrator?/2011
Answer
You can create a study without genomic data, but you cannot add genomic data to a caIntegrator study without a corresponding supported array platform. Currently, caIntegrator only supports following types of platforms: Affymatix Affymetrix Gene Expression, Affymatrix Affymetrix Copy Number, Agilent Gene Expression, and Agilent Copy Number. Please refer to the User Guide for the step-by-step instruction instructions on how to create a new platform.
To add a new platform, the array annotation file is required. For Affymatrix Affymetrix platforms, please refer to *GeWorkbench025 * for how to obtain the annotation file. For other platforms, Please please refer to the following resources:
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