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The purpose of this document is to document the 2018.10 NCI EVS Teams technical face to face meeting details.

Previous Face-to-Face (December 5 - December 7, 2018)

2017.12 Technical Face-To-Face Meetings

October Face-to-Face (October 9 - October 11, 2018)

Meeting Details

NCI Shady Grove Campus
9609 Medical Center Drive
Rockville, MD 20850
http://www.cancer.gov/about-nci/visit

Rooms:

Tuesday,

December 5

4-W-034 8:00-12:00
5-W-032 12:30- 5:00

Wednesday, December 6

3-W-030            8:00-10:30 (gap 10:30-11:00)
TE-420             11:00-12:30
3-W-030            1:00- 5:00

Thursday, December 7

1-E-030           8:00-11:00 (gap 11:00-12:00)
3-W-030          12:00- 1:00
5-E-030           1:00- 5:00

Conference Details

Remote Dial-In (all 3 days): 1-866-660-5416 # 2398515

WebEx:

October 9

Room	Time
Room 5W034	10:00 AM - 11:00 AM
Room 5W034	11:00 AM - 1:00 PM
Room 5W032	2:00 PM - 3:00 PM

Wednesday, October 10

Room	Time
Room TE420	9:00 AM - 11:00 AM
Room TE420	11:00 AM - 12:00 PM
Room 4W030	1:00 PM - 1:30 PM
Room 4W030	1:30 PM - 2:00 PM
Room 4W030	2:00 PM - 3:00 PM
Room 4W032	3:00 PM - 4:00 PM
Room 3W030	4:30 PM - 5:30 PM

Thursday, October 11

Room	Time
Room 4W032	9:00 AM - 10:00 AM
Room 4W032	10:00 AM - 12:00 PM
Room 2W910	1:00 PM - 3:00 PM

Conference Details

WebEx:

Date

WebEx Meeting

Tuesday, October 9

Tuesday 9:00 am | 8 hours | (UTC-05:00) Eastern Time (US & Canada)

Meeting number: 735 607 369

Password: MayoF2F1!

Tuesday, December 5

https://cbiit.webex.com/cbiit/j.php?MTID=

md0d70c9ae6f99111788254c9503d0419

ma7fab63a4e6b3941e0d34a05817f0c26

Join by video system

Dial 735607369@cbiit.webex.com

You can also dial 173.243.2.68 and enter your meeting number.

Join by phone

1-650-479-3207 Call-in toll number (US/Canada)

Access code: 735 607 369

Wednesday, October 10

Wednesday 9:00 am | 8 hours | (UTC-05:00) Eastern Time (US & Canada)

Meeting number: 732 606 602

Password: MayoF2F1!

Wednesday, December 6

https://cbiit.webex.com/cbiit/j.php?MTID=

m6d9ee47a1f2caac399db416f747a34a5

mb051afb0434a780179b3728ba652c6fb

Join by video system

Dial 732606602@cbiit.webex.com

You can also dial 173.243.2.68 and enter your meeting number.

Join by phone

1-650-479-3207 Call-in toll number (US/Canada)

Access code: 732 606 602

Thursday, October 11

Thursday 9:00 am | 8 hours | (UTC-05:00) Eastern Time (US & Canada)

Meeting number: 738 789 793

Password: MayoF2F1!

Thursday, December 7

https://cbiit.webex.com/cbiit/j.php?MTID=

m07625fd75411fb36bfcfb6ce436906be

Meeting Notes

2017.12 Technical Face-To-Face Meeting Notes (Copy)

mc8dbdf7f5198f6e119d6497f5f9ccc42

Join by video system

Dial 738789793@cbiit.webex.com

You can also dial 173.243.2.68 and enter your meeting number.

Join by phone

1-650-479-3207 Call-in toll number (US/Canada)

Access code: 738 789 793

Meeting Notes

2018.10 2017.12 Technical Face-To-Face Prioritization List (Copy)

Attendees

Hahn-DantonaBarnes, Elizabeth Philippa (NIH/NCI) [C] <hahndane@mail<philippa.barnes@nih.gov>;

Bauer, Scott (NIH/NCI) [C] <scott.bauer@nih.gov>;

Campbell, John (NIH/NIAID) [C] <john.campbell2@nih.gov>;Carlsen, Brian (NIH/NCI) [C] <brian.carlsen@nih.gov>;

Chang, George (NIH/NCI) [C] <george.chang@nih.gov>;Creech

De Coronado, Carol Sherri (NIH/NCI) [CE] <creechc@<decorons@mail.nih.gov>;De Coronado

Duggan, Sherri Brenda (NIH/NCI) [E] <decorons@<dugganb@mail.nih.gov>;

Endle, Cory (NIH/NCI) [C] <cory.endle@nih.gov>;

Fragoso, Gilberto (NIH/NCI) [E] <fragosog@mail.nih.gov>;

GarrettHahn-Dantona, Alpha Elizabeth (NIH/NCI) [C] <garrettal@mail.nih.gov>;

Gumbs Petty, Brenda (NIH/NCI) [C] <brenda.petty@nih.gov>;

Haber, Margaret (NIH/NCI) [E] <mhaber@<hahndane@mail.nih.gov>;

Kisler, Bron (NIH/NCI) [C] <bron.kisler@nih.gov>;

Kuntipuram, Kumar (NIH/NCI) [C] <kumar.kuntipuram@nih.gov>Li, Jordan (NIH/NCI) [C] <jordan.li@nih.gov>;

Lipow, Stephanie (NIH/NLM) [C] <lipows@mail.nlm.nih.gov>;

Lucas, Jason (NIH/NCI) [C] <jason.lucas@nih.gov>;

MinneryMensah, Cynthia Jacob (NIH/NCI) [C] <minneryc@mail.nih.gov>;Muhlbradt, Erin (NIH/NCI) [C] <muhlbradtee@<mensahjg@mail.nih.gov>;

Olson, Nels (NIH/NCI) [C] <olsonne@mail.nih.gov>;

Ong, Kim (NIH/NCI) [C] <kim.ong@nih.gov>;

Quan, Sharon (NIH/NCI) [C] <quansh@mail.nih.gov>;

Quinn, Theresa (NIH/NCI) [C] <quinnt@mail.nih.gov>;

Remennik, Lyubov (NIH/CC/BTRISNCI) [E] <lyubov@cc<lyubov.remennik@nih.gov>;

Roth, Laura (NIH/NCI) [C] <laura.roth@nih.gov>;

Safran, Tracy (NIH/NCI) [C] <safrant@mail.nih.gov>;Sioutos

Stancl, Nicholas Craig (NIH/NCI) [C] <nsioutos@mail<craig.stancl2@nih.gov>;Steen

Trikha, Abby Akhilesh (NIH/NCI) [C] <abby<trikhaa2@mail.steen@nih.gov>gov>;

Thomas, Nicole (NIH/NCI) [C] <thomasni@mail.nih.gov>;

Din, Sana (NIH/NCI) [C] <Sana.din@nih.gov>;

Whiteman, Lori (NIH/NCI) [C] <whitemanl@mail.nih.gov>;

Wong, Joanne Warzel, Denise (NIH/NCI) [C] <joanne.wong2@nih.gov>;Wright, Larry (NIH/NCI) [E] <lwright@<warzeld@mail.nih.gov>;

Wynne, Robert (NIH/NCI) [C] <wynner@mail.nih.gov>

References

Agenda

Previous Face-to-Face (December 5 - December 7, 2017)

2017.12 Technical Face-To-Face Meetings

Agenda

...

EVS Project Architecture

(so far only LexEVS)Proposed Biomarker Terminology Sets_2017-12-05.pptx

EVS Project Group Discussion (During regular call-in time)

Proposed topics for discussion:

(High Level Overview) Discuss direct calls to NCIt for value sets
- Performance
- Workflow
- API Implications

Discuss Mappings and cross-walking coding schemes

SwissProt, ICD-0-3, and MED-RT as the successor of NDRFT

Associations from/to
Cross walking coding schemes
Loader considerations for Mesh, RxNorm

Kim Ong

Tracy Safran

Rob Wynne

Larry Wright

Margaret Haber

Sherri De Coronado

Gilberto Fragoso

		Tuesday, October 9
		Tuesday, December 5
Time	Location	Topics	ParticipantsResources
9:00 AM - 1110:00 AM	4-W-034	EVS Status and Future Direction Discuss EVS current state, trends, and future directions Larry to give brief overview of EVS infrastructure, resources, and services. Review overall technical workflow and architecture. Group discussion of future possible directions and priorities.	Broad cross-EVS participation			Open
10:00 AM - 11:00 AM	Room 5W034	Admin UI Modernization Feedback from Akhilesh, Rob and Tracy regarding existing admin GUI. Propose ideas for enhancements and modernization.	Rob, Tracy, Akhilesh, Cory, Scott, Craig
11:00 AM - 121:00 PM	4-W-034	EVS Technical Infrastructure, Issues, and Options Flesh out architecture and workflow diagrams, identify key areas of discussion Review overall architecture and expand/update Identify areas where current infrastructure is changing or problematic	Primarily EVS technical team members (several have conflicting clinical trials meeting)	EVS Project Architecture
Noon - 1:00 PM		Lunch
Room 5W034	EVS API Services Review/ Analysis of API Gaps/Duplication Identify Gaps Identify Duplication Architecture Considerations Limit duplication of services New services to serve all Identify consumers and usage Who are the consumers Are there existing requirements Propose ideas for possible solutions Building out LexEVS REST services Incorporation of micro services Expanding evsapi Infrastructure Cloud? Others?	Rob, Tracy, Akhilesh, Kim, Jason, Scott, Cory, Craig, Ruth, John Campbell, Stephanie Lipow
1:00 PM - 2:00 PM		Lunch	1:00 PM - 2:00 PM	5-W-032	User Group Discussion - caDSR User Teams to share how they are using EVS and discuss requirements/priorities for the future. APIs: Java, REST (CTS2 or 3-store), SPARQL, FTP Backwards compatibility of server/client/data releases Incl: Java/jar file issues and future Incl: New terminology server API/content/other needs.	caDSR contact - Denise, Philippa, developers
2:00 PM - 3:00 PM	5-W-032	User Group Discussion - FDA and CDISC User Teams to share how they are using EVS and discuss requirements/priorities for the future. APIs: Java, REST (CTS2 or 3-store), SPARQL, FTP Backwards compatibility of server/client/data releases Incl: Java/jar file issues and future Incl: New terminology server API/content/other needs.	Editors Liz, Erin, Brenda	Room 5W032	LexEVS Model Changes Propose ideas for expanded OWL Support	Gilberto, Rob, Tracy, Akhilesh (optional), Kim, Jason, Scott, Cory, Craig
	3:00 PM - 4:00 PM	5-W-032	User Group Discussion - CTRP / CTS-API User Teams to share how they are using EVS and discuss requirements/priorities for the future. APIs: Java, REST (CTS2 or 3-store), SPARQL, FTP Backwards compatibility of server/client/data releases Incl: Java/jar file issues and future Incl: New terminology server API/content/other needs.	CTRP / CTS-API - managers, developers, Tiger team (Gisele, Samantha, David, Brian, Peter, Tracy, Jason, others)
		Wednesday, December 6
Time	Location	Topics		Resources
9:00 AM - 10:00 AM	3-W-030	EVS Architecture Discuss Potential of using a variety of architectures Proposed topics for discussion: Micro services Considerations: Determine how to synchronize data on the back-end. LexEVS DB and Triple Store need to be in sync when NCIt information (such as value sets) changes. Determine the potential of a loader that relies on SPARQL queries (after SPARQL query load, kick off LexEVS loader) LexEVS integration with EVS Triple Store Considerations: Determine use of triple store calls in parallel with LexEVS DB Determine performance improvements over LexEVS DB Determine what calls could be made to the triple store instead of LexEVS. Determine use of Stardog built in graph database. Determine performance considerations for hierarchy traversal for graph resolution. Future implementation considerations	Gilberto Fragoso Kim Ong Tracy Safran Rob Wynne Larry Wright Margaret Haber Sherri De Coronado Bron Kisler Systems team John Cambell /Ruth Monterio users of the SQARL	MicroServiceProp.pptx TripleStore.pptx
10:00 AM - 12:00 PM	10:00-10:30 3-W-030 11:00-12:30 TE-420 (Can't fill gap 10:30-11:00)	EVS Architecture - Technical Discussion with Systems team Discuss technical aspects of potentially using a variety of architectures Proposed topics for discussion: Micro services Considerations: Embedded Tomcat implementations Alternative web service platforms Container/Port clashes LexEVS integration with EVS Triple Store Considerations: SPARQL clients Docker options Future implementation considerations Java Python Node.js/javascript Others?	Systems team
Noon - 1:00 PM		Lunch
	Room 5W032	Open
		Wednesday, October 10
Time	Location	Topics	Participants
9:00 AM - 11:00 AM	Room TE420	Technical Discussions Debrief Findings and Proposals EVS API Services LexEVS Model Changes - OWL	Lyuba, Sherri, Gilberto, Rob, Tracy, Kim, Jason, Scott, Cory, Craig, Stephanie Lipow
11:00 AM - 11:30 AM	Room TE420	User Group Discussion - caDSR Team to share how they are using EVS and discuss requirements/priorities for the future.	caDSR representatives (Denise Warzel, Brenda Duggan, Phillipa Barnes), Lyuba, Sherri, Rob, Tracy, Kim, Jason, Scott, Cory, Craig
11:30 AM - 12:00 PM		Open
Noon - 1:00 PM		Lunch
1:00 PM - 1:30 PM	Room 4W030	User Group Discussion - CTRP Team to share how they are using EVS and discuss requirements/priorities for the future.	CTRP representatives, Elizabeth Hahn-Dantona, George Chang, Lyuba, Sherri, Rob, Tracy, Kim, Jason, Scott, Cory, Craig, Stephanie Lipow
1:30 PM - 2:00 PM	Room 4W030	User Group Discussion - CTS Team to share how they are using EVS and discuss requirements/priorities for the future.	CTS representatives (Elizabeth Hahn-Dantona, George Chang) , Lyuba, Sherri, Rob, Tracy, Kim, Jason, Scott, Cory, Craig
1:00 PM - 2:00 PM	3-W-030	Kim Ong Tracy Safran Rob Wynne Editor's Representative/Margaret Haber Larry Wright Sherri De Coronado Gilberto Fragoso	Proposed Biomarker Terminology Sets_2017-12-05.pptx	2:00 PM - 3:00 PM	3-W-030	NCI Systems Discussions Proposed topics for discussion: Discuss CI and Docker Status/Roadmap Discuss the current status of the Docker scripts used to build/test LexEVS components. Discuss the current NCI Docker images used in LexEVS tests. Discuss NCI's current status and future plans to use Docker. Discuss Tech Stack Upgrades Discuss DB upgrade: MySQL 5.6 vs. MariaDB Discuss migrating from Anthill Pro to Jenkins	Jacob and Systems team Gilberto Fragoso Rob Wynne Tracy Safran Kim Ong Larry Wright Margaret Haber Sherri De Coronado Q/A (Sana)
3:00 PM - 4:00 PM (added meeting)	3-W-030	User Group Discussion - caDSR Continued discussion of current API APIs: Java, REST (CTS2 or 3-store), SPARQL https://github.com/CBIIT/cadsr-semantic-tools	caDSR - Philippa, Vikram, Natalia, Rui	EVS REST API https://evsrestapi.nci.nih.gov/evsrestapi/swagger-ui.html#/evs-controller CTS2 REST API https://lexevscts2.herokuapp.com/cts2 caDSR LexEVS API calls caDSR-EVS-Calls-NA.xlsx caDSR-EVS-Calls-VS.xlsx
Room 4W030	Systems Discussion Review Tech Stack Docker Roadmap LexEVS Services Alignment	Systems Team, Rob, Tracy, Kim, Jason, Lyuba, Sherri, Scott, Cory, Craig
4:30 PM - 5:30 PM	Room 3W030	Prioritization and debrief Determine strategic direction and priorities	Lyuba, Sherri, Rob, Tracy, Kim, Jason, Scott, Cory, Craig
				Thursday, December 7		Thursday, October 11
Time	Location	Topics		Resources
9:00 AM - 12 10:00 PM 1-E-030	API Services Proposed topics for discussion: Overview of EVS REST API and future direction Discuss what exists today. Discuss future plans. Overview of LexEVS provided API services and future direction LexEVS API LexEVS Remote API LexEVS REST API (CTS2-based) Discuss a new REST service Discuss user requirements for a new REST API Document the gaps from CTS2 REST API and user requirements. Explore how simple searches and searches with an identifier and how this could replace most of the remote API. Consider a new REST API to supplement CTS2 REST Services Propose examination of current CTS2 REST API Capture what doesn't work for the end users. Review gap between Remote API and REST services. Discuss surfacing terminology history in a REST service (NCIt and ULMS) Determine what history information is required by the user to be returned. Discuss surfacing history of value sets in a REST service Discuss if this fits into LexEVS or is part of a new REST API	Kim Ong Tracy Safran Rob Wynne End users such as CTRP, others Larry Wright Margaret Haber Sherri De Coronado Gilberto Fragoso	DiffCTS2_LexEVS.pptx
Noon - 1:00 PM	3-W-030	Lunch
AM	Room 4W032	Tech Talk RMI Usage, Debugging and Possible Forwarding of Stack traces	Rob, Tracy, Kim, Scott, Cory, Craig, Jason
10:00 AM - 12:00 PM	Room 4W032	JIRA Review API Issues On-Hold Issues	Rob, Tracy, Kim, Scott, Cory, Craig, Jason
Noon - 1:00 PM		Lunch
1:00 PM - 3:00 PM	Room 2W910	5-E-030	Prioritization and debrief Determine strategic direction and priorities

Wrap-Up Session (CANCELLED)

Time for additional discussion and planning.

Lyuba, Sherri, Gilberto, Rob, Tracy, Kim, Jason, Scott, Cory, Craig

Content

Space Tools

Page History

Versions Compared

Key

Previous Face-to-Face (December 5 - December 7, 2018)

October Face-to-Face (October 9 - October 11, 2018)

Meeting Details

Meeting Notes

Meeting Notes

Attendees

References

Agenda

Previous Face-to-Face (December 5 - December 7, 2017)

Agenda

Tuesday, October 9

Tuesday, December 5

EVS Status and Future Direction

EVS Technical Infrastructure, Issues, and Options

User Group Discussion - caDSR

User Group Discussion - FDA and CDISC

User Group Discussion - CTRP / CTS-API

Wednesday, December 6

EVS Architecture

EVS Architecture - Technical Discussion with Systems team

Wednesday, October 10

EVS Project Group Discussion (During regular call-in time)

NCI Systems Discussions

User Group Discussion - caDSR

Thursday, December 7

Thursday, October 11

API Services

Prioritization and debrief

Wrap-Up Session (CANCELLED)