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...

EntityCode

smq_list.smq_code

EntityDescription

smq_list.smq_name

isActive

True

Presentation

 

Presentation.PropertyName

“T-1”

Presentation.Value

smq_list.smq_name

Presentation.RepresentationalForm

“SMQ”

Presentation.IsPreferred

true

Comment

 

Comment.PropertyName

“Name”

Comment.Value

smq_list.smq_name

Comment

 

Comment.PropertyName

“Code”

Comment.Value

smq_list.smq_code

Comment

 

Comment.PropertyName

“Level”

Comment.Value

smq_list.smq_level

Comment

 

Comment.PropertyName

“Description”

Comment.Value

smq_list.smq_description

Comment

 

Comment.PropertyName

“Source”

Comment.Value

smq_list.smq_source

Comment

 

Comment.PropertyName

“Note”

Comment.Value

smq_list.smq_note

Comment

 

Comment.PropertyName

“MedDRA Dictionary Version”

Comment.Value

smq_list.MedDRA_version

Comment

 

Comment.PropertyName

“Status”

Comment.Value

smq_list.status

Comment

 

Comment.PropertyName

“Algorithm”

Comment.Value

smq_list.smq_algorithm

Relations

---

Association

Source

Target

Soc_hlgt

“hasSubtype”

soc_hlgt.soc_code

soc_hlgt.hlgt_code

Hlgt_hlt

“hasSubtype”

hlgt_hlt.hlgt_code

hlgt_hlt.hlt_code

Hlt_pt

“hasSubtype”

hlt_pt.hlt_code

hlt_pt.pt_code

Llt1

“hasSubtype”

llt.pt_code

llt.llt_code

Smq_content

“hasSubtype”

smq_content.smq_code

term_code2

...

Mapping of MedDRA tables to LexGrid Coding Scheme

Meddra_release

header_needed

MedDRA Table

MedDRA field

LexEVS Object

LexEVS field

meddra_release

version

CodingScheme

RepresentsVersion

Meddra_release

Language

---

---

 

Meddra_history_english

header_needed

MedDRA Table

MedDRA field

LexEVS Object

LexEVS field

Meddra_history_english

Term_code

---

---

Meddra_history_english

Term_name

---

---

Meddra_history_english

Term_addition_version

---

---

Meddra_history_english

Term_type

---

---

Meddra_history_english

Action

---

---

...

MdhierMdhier

header_needed

MedDRA Table

MedDRA field

LexEVS Object

LexEVS field

Mdhier

Pt_code

---

---

Mdhier

Hlt_code

---

---

Mdhier

Hlgt_code

---

---

Mdhier

Soc_code

---

---

Mdhier

Pt_name

---

---

Mdhier

Hlt_name

---

---

Mdhier

Hlgt_name

---

---

Mdhier

Soc_name

---

---

Mdhier

Soc_abbrev

---

---

Mdhier

Pt_soc_code

---

---

Mdhier

Primary_soc_fg

---

---

 

Intl_ord

header_needed

MedDRA Table

MedDRA field

LexEVS Object

LexEVS field

Intl_ord

Intl_ord_code

Entity

Property.Value

Intl_ord

Soc_code

 

 

...

SocSoc

header_needed

MedDRA Table

MedDRA field

LexEVS Object

LexEVS field

Soc

Soc_code

Entity

EntityCode

Soc

Soc_name

Entity

Entity

EntityDescription

Presentation.Value

Soc

Soc_abbrev

Entity

Presentation.Value

Soc_hlgt

header_needed

MedDRA Table

MedDRA field

LexEVS Object

LexEVS field

Soc_hlgt

Soc_code

AssociationPredicate

AssociationSource

Soc_hlgt

Hlgt_code

AssociationPredicate

AssociationTarget

...

HlgtHlgt

header_needed

MedDRA Table

MedDRA field

LexEVS Object

LexEVS field

Hlgt

Hlgt_code

Entity

EntityCode

Hlgt

Hlgt_name

Entity

Entity

EntityDescription

Presentation.Value

 

Hlgt_hlt

header_needed

MedDRA Table

MedDRA field

LexEVS Object

LexEVS field

Hlgt_hlt

Hlgt_code

AssociationPredicate

AssociationSource

Hlgt_hlt

Hlt_code

AssociationPredicate

AssociationTarget

...

HltHlt

header_needed

MedDRA Table

MedDRA field

LexEVS Object

LexEVS field

Hlt

Hlt_code

Entity

EntityCode

Hlt

Hlt_name

Entity

Entity

EntityDescription

Presentation.Value

 

Hlt_pt 

header_needed

MedDRA Table

MedDRA field

LexEVS Object

LexEVS field

Hlt_pt

Hlt_code

AssociationPredicate

AssociationSource

Hlt_pt

Pt_code

AssociationPredicate

AssociationTarget

...

PtPt

header_needed

MedDRA Table

MedDRA field

LexEVS Object

LexEVS field

Pt

Pt_code

Entity

EntityCode

Pt

Pt_name

Entity

Entity

EntityDescription

Presentation.Value

Pt

Pt_soc_code

Entity

Property.Value

...

LltLlt

header_needed

MedDRA Table

MedDRA field

LexEVS Object

LexEVS field

Llt

Llt_code

Entity

AssociationPredicate

EntityCode

AssociationTarget

Llt

Llt_name

Entity

Entity

EntityDescription

Presentation.Value

Llt

Pt_code

AssociationPredicate

AssociationSource

Llt

Llt_currency

---

---

...

Smq_list

header_needed

MedDRA Table

MedDRA field

LexEVS Object

LexEVS field

Smq_list

Smq_code

Entity

Entity

EntityCode

Comment.Value

Smq_list

Smq_name

Entity

Entity

Entity

EntityDescription

Presentation.Value

Comment.Value

Smq_list

Smq_level

Entity

Comment.Value

Smq_list

Smq_description

Entity

Comment.Value

Smq_list

Smq_source

Entity

Comment.Value

Smq_list

Smq_note

Entity

Comment.Value

Smq_list

MedDRA_version

Entity

Comment.Value

Smq_list

Status

Entity

Comment.Value

Smq_list

Smq_algorithm

Entity

Comment.Value

...

Smq_content

header_needed

MedDRA Table

MedDRA field

LexEVS Object

LexEVS field

Smq_content

Smq_code

AssociationPredicate

AssociationSource

smq_content

Term_code

AssociationPredicate

AssociationTarget

Smq_content

Term_level

Entity

Property.Value

Smq_content

Term_scope

Entity

Property.Value

Smq_content

Term_category

Entity

Property.Value

Sqm_content

Term_weight

Entity

Property.Value

Smq_content

Term_status

Entity

Property.Value

Smq_content

Term_addition_version

Entity

Property.Value

Smq_content

Term_last_modified_version

Entity

Property.Value

 

 

Error Messages

File expected is missing

0 - error - Thu May 23 13:10:26 CDT 2013 - Following files are MISSING in directory provided:
/C:/Users/m113216/Desktop/MedDRA/TestData/Missing PT File/pt.asc
-
1 - fatal - Thu May 23 13:10:26 CDT 2013 - Failed while running the conversion - null
Load process finished - Thu May 23 13:10:26 CDT 2013
Errors Logged: true
Warnings Logged: false
End State: failed
 
Multiple files expected is missing
0 - error - Thu May 23 13:11:29 CDT 2013 - Following files are MISSING in directory provided:
/C:/Users/m113216/Desktop/MedDRA/TestData/Missing Mult Files/meddra_release.asc
/C:/Users/m113216/Desktop/MedDRA/TestData/Missing Mult Files/mdhier.asc
/C:/Users/m113216/Desktop/MedDRA/TestData/Missing Mult Files/smq_list.asc
/C:/Users/m113216/Desktop/MedDRA/TestData/Missing Mult Files/soc.asc
/C:/Users/m113216/Desktop/MedDRA/TestData/Missing Mult Files/pt.asc
/C:/Users/m113216/Desktop/MedDRA/TestData/Missing Mult Files/soc_hlgt.asc
/C:/Users/m113216/Desktop/MedDRA/TestData/Missing Mult Files/smq_content.asc
-
1 - fatal - Thu May 23 13:11:29 CDT 2013 - Failed while running the conversion - null
Load process finished - Thu May 23 13:11:29 CDT 2013
Errors Logged: true
Warnings Logged: false
End State: failed
...
File is empty
0 - error - Thu May 23 13:12:14 CDT 2013 - Following files are EMPTY in directory provided:
/C:/Users/m113216/Desktop/MedDRA/TestData/Empty HLT File/hlt.asc
-
1 - fatal - Thu May 23 13:12:14 CDT 2013 - Failed while running the conversion - null
Load process finished - Thu May 23 13:12:14 CDT 2013
Errors Logged: true
Warnings Logged: false
End State: failed
 
File missing a data field
0 - info - Thu May 23 13:14:40 CDT 2013 - Checking validity of data imported. -
1 - error - Thu May 23 13:14:40 CDT 2013 - ERROR in data imported from file (row 0): hlgt.asc -
2 - error - Thu May 23 13:14:40 CDT 2013 - <REQUIRED>: hlgt_code: null
<REQUIRED>: hlgt_name: null
<IGNORED>: htgt_whoart_code: null
<IGNORED>: hlgt_harts_code: null
<IGNORED>: hlgt_costart_sym: null
<IGNORED>: hlgt_icd9_code: null
<IGNORED>: hlgt_icd9cm_code: null
<IGNORED>: hlgt_icd10_code: null
<IGNORED>: hlgt_jart_code: null
-
3 - info - Thu May 23 13:14:40 CDT 2013 - Completed mapping.  Now saving to database -
4 - fatal - Thu May 23 13:14:41 CDT 2013 - Failed while running the conversion - org.LexGrid.LexBIG.Exceptions.LBParameterException: The URN and the version must be populated.
Load process finished - Thu May 23 13:14:41 CDT 2013
Errors Logged: true
Warnings Logged: false
End State: failed

    

  
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