NIH | National Cancer Institute | NCI Wiki  

Versions Compared

Old Version 14

changes.mady.by.user Unknown User (parkj4)

Saved on

compared with

New Version 15

changes.mady.by.user Unknown User (parkj4)

Saved on

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

...

  • Once loaded, the ontology repository settings will need to be changed if configuring a BiomedGT project. From the menu bar, click 'OWL', and 'Ontology Repositories'.  The Repository Manager window is now displayed with a list of default project repository locations underneath the 'Project repository' tab.  Remove the following URL repositories: 

     _

     _

...

http://ncicb.nih.gov/xml/owl/EVS/BGTCommonWords.owl
http://ncicb.nih.gov/xml/owl/EVS/BGTCommonWords.owl
http://ncicb.nih.gov/xml/owl/EVS/BGTCommonWords.owl

  • There should be 2 URLs remaining, one referencing BFO, and another referencing protege-dc. Those will remain as is.
  • The removed repositories will then be re-added to the list, but referenced locally.  Accessing local copies of an external ontology increases performance as well as dependability of the ontology (the ontology URL might be down).  To readd locally, click on the white plus button located at the top right of the window.

...