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NameRolePresent
Wright, Larry NIH/NCI   x
Fragoso, Gilberto NIH/NCI     

De Coronado, Sherri    

NIH/NCI    x

Safran, Tracy

NIH/NCI    x
Ong, Kim L
IS x
Lucas, Jason R
IS x
Bauer, Scott  Mayo x
Stancl, Craig
Mayo x
Endle,  CoryMayo x
Wynne, Robert    NIH/NCI x
Pan, JJ
NIH/NCI [E] x
Tran, Tin    NIH/NCI [C]  x
Ahmed, Shamim
NIH/NC [C]  
Haber, Margaret (NIH/NCI) 
Roth, Laura (NIH/NLM)  
Ramani, Vivek (NIH/NCI) [C]  
Carlsen, Brian (NIH/NCI) [C] 
Wong, Joanne   x

Kuntipuram, Kumar

  x

 

Action Items

 #AssignedDescriptionDate IdentifiedDue DateDate CompletedStatus
64ScottTo follow up on URI's on OWL2 with Harold.   on hold
136ScottPoint the CTS2 API page to Stage PROD (wiki) - originally planned on Stage, but now planning on PROD.   open
139KumarTo do an analysis of the Project plan for budgeting purposes.   open
140ScottUpdate struts jar to 2.3.16   

in progress

149ScottContact Jacob about X11 access on DEV   done
150ScottDocument URI Resolver more thoroughly   opendone
151ScottJIRA Item to move master to lexevs/lexevs   open
152CraigSchedule project plan/roadmap meeting.    open
153CraigSend JJ project plan and update email list for future emails.   open
154Larry

Provide an email update to NCBO, NLM, and Mayo with current activities and what has been built.

   

open

Progress

Immediate Priorities and Problems (Mayo Team)

Scott:  CTS2 6.1 Service Deployment, 6.1.1 Struts update,  CTS2 Service Updates - Value Set Modules and CTS2 1.1 Based Framework

Cory:  CTS2 Client UI, Informatics Deployment

Craig: Project Plan Updates

  
caDSR and Value Set and other URIs

Best approach would be to continue to include to discuss during the weekly calls.  

  
Tech Stack Notes

Revisit Java 1.8 update

  • Decision to be made in May 2014 regarding 1.8. 
  • If can push the 1.7 update, then that would give time to determine availability of 1.8 at NCI.
  • However, Scott suggests that we do start update to 1.7 sooner than later.  
  • Anticipated 1.8 issues - there are differences in Java that cause compiler issues.  (Tracy)
  • Agreed that we will move to 1.7.
  
Continuing Development through next fiscal year (Larry)

Kumar  to deliver a project plan analyses.

  • Need to have Struts added to the plan. 
  • Craig will do this and provide to Kumar as soon as possible.
  
Struts Security Update (Jason)

Status (see above)

  
  • 6.1.1 Struts update - Scott generated testing reports and need to give those to Tin.  
  • CTS2 6.1 Service Deployment - URLS are pointing to stage.
  • 1.1 Based Framework - updates based on code review and issues identified (search and value set coding scheme and version).  
  • UI and CTS2 deployment - planning to get configured over the next week.   Testing distributed mode for CTS2 services.  
  • There will be documentation/code sample changes for the 1.1 based CTS2 framework services.  

Cory:  CTS2 Client UI, Informatics Deployment

  • NLM services (1.0 based)  and transforming to the 1.1 based client.   This is complete.   Next need to incorporate the NLM authentication.
  • Search has been included in the client to allow users to search on value set names. 
  • Informatics configuration is planned and hope to have deployed in next week or 2. 

Craig: Project Plan Updates

  • Add JJ to the project plan list
  • Schedule meeting with Sherri, Larry, Kumar, JJ to discuss project plan and roadmap. 
  • Tech Stack and associated dependencies.  Identified by JUnits once components are upgraded.  
  
caDSR and Value Set and other URIs (Weekly Status)
  • No updates this week.
  
Continuing Development through next fiscal year (Kumar)
  • Will provide more details during planning meeting.  
6.1 Deployment

Issues with CTS2

  • Scott can return to this issues once complete with Struts.  
  • May need assistance from systems team to get access to logs.  (contact Jacob)  
  
Max clause count issue .

 Nci to report on follow up 

  • Strategy was to increase max count and verify if would work or not.  Tracy to make the request.  Highest tested was 800k.  Scott to check with Kevin on what effect this max will have on memory/resources.  
  • Scott to look into breaking up the indexes. 
  • This issue is against the API directly.   Breaking up the index may not not help in this case.   

NCI to report on follow up    

  •  There was a problem going directly against the API.
  •  Look at this again when we evaluate Lucene
  • lbConfig.prop to be updated to 800,000  NCI/Tracy to put in a ticket to do this.      
    Scott to discuss with Kevin what type of memory increase this may be or other issues it may cause
  
Discuss search issues around forward slash / in contains search

JIRA item done discuss priority

  • This is against the search extension.
  • Scott created Jira item
  •  Consider this as part of the Lucene evaluation. 
  • JIRA item done discuss priority 
  • Issue with the contains search. 
  • Issue with the search extension.
  • This is after the VS module work.  And during the Lucene investigation.        
  •   Scott to look at the analyzers for this. 
  
Mapping Index issues

Discuss Stack Trace and report on updating of browser code

  • see above
  
URI Resolver Documentation
  • included as part of installation.
  • Scott can provide text to describe what the URI resolver is and how it is installed as part of the CTS2 LexEVS Service.
  • When updating Data, what needs to be restarted?  (Tracy)  Scott to document this.    
  
(update)
  •  Scott checked with Kevin about the proposal for Tracy to change to 800K.  Kevin said this is defaulting to 1000 in Lucene - anything above that is undefined.   No idea how things will perform.  Tracy did test on Data QA by incrementing 100k at a time.  
  • Tracy will continue to evaluate - better than having it fail for the user. 
  • Scott could evaluate as well, but this is lower priority for now.  NCI will evaluate now. 
  
NCI, NLM, NCBO and Mayo Planning (Monthly Meetings, Face to Face)
  • Provide an email update with current activities and what has been built.   (Larry)
  • No interest in monthly (at this time).
  • Face to Face could be discussed.  (June/July or September)
  
Struts 6.0 Update
  • Not an immediate task.  Users should be able to move from LexEVS 6.0 to LexEVS 6.1.  If LexEVS 6.0 were to get shut down, then this could come back as a higher priority. 
  
URI Resolver Documentation  
UMLS Mapping Files
  • Tracy cannot get that to load - Mappings.   Tracy to send Scott the details and he can take a look. 
  
FDA Codes (REST service)
  • ISO Country and Region codes in Meta and retrievable via advanced search.  Need to figure out how to make available to FDA users - possible REST call that would pull out content and return via a REST call.   Would use CTS2 LexEVS services to pull this content.   Can currently can do an advanced search.  
  • If created as a Value Set, then possible to use CTS2 resolved value set services.   
  • NCI will continue to look at this.  Can provide weekly updates.
GitHub
  • The lexevs/lexevs was going to be location for issues
  • Continued development would be in lexevs/lexevs
  • At release time, code would be from lexevs/lexevs into NCIP channel
  • NCIP will fork from lexevs/lexevs.  (Need a JIRA Item for this)
  

 

 

 

JIRA Issues

Description
Jira
serverNCI Tracker
keyLEXEVS-570
Jira
serverNCI Tracker
keyLEXEVS-572
Jira
serverNCI Tracker
keyLEXEVS-573
Jira
serverNCI Tracker
keyLEXEVS-574
Jira
key
serverNCI Tracker
LEXEVS-576
Jira
serverNCI Tracker
keyLEXEVS-579
Jira
serverNCI Tracker
keyLEXEVS-583586
Jira
serverNCI Tracker
keyLEXEVS-584594
Jira
serverNCI Tracker
keyLEXEVS-585597
Jira
serverNCI Tracker
keyLEXEVS-586598
Jira
serverNCI Tracker
keyLEXEVS-587599
Jira
serverNCI Tracker
keyLEXEVS-588605
Jira
serverNCI Tracker
keyLEXEVS-589606
Jira
serverNCI Tracker
keyLEXEVS-592607
Jira
serverNCI Tracker
keyLEXEVS-593608
Jira
serverNCI Tracker
keyLEXEVS-594609
Jira
serverNCI Tracker
keyLEXEVS-595612
Jira
serverNCI Tracker
keyLEXEVS-596613
Jira
serverNCI Tracker
keyLEXEVS-597615
Jira
serverNCI Tracker
keyLEXEVS-598616
Jira
serverNCI Tracker
keyLEXEVS-599617
Jira
serverNCI Tracker
keyLEXEVS-600618
Jira
serverNCI Tracker
keyLEXEVS-601619
Jira
serverNCI Tracker
keyLEXEVS-602620
Jira
serverNCI Tracker
keyLEXEVS-603621
Jira
serverNCI Tracker
keyLEXEVS-604622
Jira
serverNCI Tracker
keyLEXEVS-605623
Jira
serverNCI Tracker
keyLEXEVSLEXEVSCTS2-6062
Jira
serverNCI Tracker
keyLEXEVS-607
Jira
serverNCI Tracker
keyLEXEVS-608
Jira
serverNCI Tracker
keyLEXEVS-609LEXEVSCTS2-3

Project Plan Changes

#DescriptionDue DateResourcesNotesRisksMitigation
 None     
       
       

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