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Page History
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The caNanoLab Software License applies.
Setting the Ant Build Properties
Setting Properties
Follow these steps to set the build and deploy properties required for building and deploying caNanoLab 2.1.1.
Step 1. Download caNanoLab from GitHub
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Property | Description |
|---|---|
file.repository.dir | A directory on the system that hosts the Wildfly application server for storing uploaded files, for example, C:/apps/caNanoLab. |
admin.email | The email address that receives requests for new user accounts, for example, the NCICBIIT application support email for the NCICBIIT installation. |
ldap.authentication.enabled | A Boolean flag to indicate whether or not to use LDAP for user authentication. caNanoLab 2.1 and beyond does not support LDAP authentication. Set this to false. |
database.server | The name of the server hosting the database, for example, localhost. |
database.port | The database port number, for example, 3306. |
database.user | The database user name used in the caNanoLab application, for example, cananolab_app. |
database.password | The password for the database that the user specified above, for example, go!234. |
database.system.user | The system database user name with privileges to create a database, create tables, and grant user accesses to a database, for example, root. |
database.system.password | The password for the system database that the user specified above, for example, rootpass. |
jboss.server.dir | The Wildfly server directory, for example: |
Installation and Deployment
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Installing and Deploying caNanoLab 2.1.1
Follow these steps to build and deploy caNanoLab 2.1.1.
Step 1. Deploy Database Changes for Migrating to CSM 5.2
Execute the following scripts in the order specified below.
Create the following table:
CREATE TABLE favorite_data (
favorite_data_id bigint(20) DEFAULT NULL,
data_id bigint(20) DEFAULT NULL,
data_type varchar(200) DEFAULT NULL,
data_name varchar(200) DEFAULT NULL,
login_name varchar(200) DEFAULT NULL,
protocol_file_id bigint(20) DEFAULT NULL,
pubmed_id bigint(20) DEFAULT NULL,
editable tinyint(1) DEFAULT '0',
description text,
protocol_file_title varchar(200) DEFAULT NULL );
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https://github.com/CBIIT/common-security-module/blob/master/software/common/resources/db/db-upgrade/mysql/MigrationScript5.0MySQL.sql
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https://github.com/CBIIT/common-security-module/blob/master/software/common/resources/db/db-upgrade/mysql/MigrationScript5.1MySQL.sql+
Execute the following script to reset password for all the accounts:
update csm_user set password = 'zJPWCwDeSgG8j2uyHEABIQ==';
update csm_user set first_time_login = 1;
Migrate encryption from 4.x CSM database
CSM 5.0 has introduced using AES encryption to encrypt CSM User information while storing it in CSM_USER table. If you are upgrading CSM from 4.x to 5.x, apart from migrating the database, you will need to run encryption migration. This step expects that the PASSWORD column values in CSM_USER are not altered from the original values created through the CSM API.
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ant -Dproperties.file=upgrade.properties migration:run.
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Step 2. Upgrade to caNanoLab 2.1.1
Follow these steps to install and deploy caNanoLab.
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