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NameRolePresent
Wright, Larry NIH/NCI   x
Fragoso, Gilberto NIH/NCI     

De Coronado, Sherri    

NIH/NCI    

Safran, Tracy

NIH/NCI [C] 
Ong, Kim L
IS x
Lucas, Jason R
IS x
Bauer, Scott  Mayo x
Stancl, Craig
Mayo x
Endle,  CoryMayo 
Wynne, Robert    NIH/NCI [C] x
Tran, Tin    NIH/NCI [C]  

Kuntipuram, Kumar

NIH/NCI [C] x
Haber, MargaretNIH/NCI

 x

Sana  x
PrestonASUx

Action Items

AssignedDescriptionDate IdentifiedDue DateDate CompletedStatus
      

Agenda

Current Sprint  Sprint 58 (June 8, 2017 – June 21, 2017)

16X237 Agile Development - Sprint Status#16X237AgileDevelopment-SprintStatus-Sprint58

ASU Team (Preston Lee, Austin Michne, Mohit Mulchandani)

  • Overview and Discussion

Discussion Points:

LexEVS team approached by the ASU group based on docker activity in github and meeting notes.  Preston Lee from the VA through ASU spoke on his efforts including ocal project leveraging LexEVS including a commercial application.  Resolves terminology through the UI.  Screen shots shown of commercial UI.  Uses FIHR. Need to be able to distribute this. 

Service marketplace meant to provide backend applications that could be autowired into health services.  Would like to add to this by distributing LexEVS in the same manner.  OCI known as Docker is the target package and this team is offering to help get this done.  Garrick Hammel is working on the container image. 

HSPC or health services platform consortium provides guidelines.  Need to be able to move and scale services as necessary and the policies are designed to facilitate that.  Environment variables are used to get things like database configuration at run-time.  Used by health and research organizations. 

Can't be just for VA or Cerner for instance.  Licensing is working around open source licenses.  Content loaded via script at run-time.  Can't be preload-ed due to licensing issues. 

Decision Points:  LexEVS to possibly allow a pull request for configuration.

Sprint Status

 

Current Sprint  Sprint 58 (June 8, 2017 – June 21, 2017)

Future focus on value sets, unless CTRP becomes a priority.


16X237 Agile Development - Sprint Status#16X237AgileDevelopment-SprintStatus-Sprint58

Sprint Status

 

LexEVS REST Services

Discussion Points:

Goals of REST API from CTRP and others

  • Much simpler format with just thesaurus content
    • Harmonized with the REST (JSON) output with the CTS2 service.   This will make it compatible with users of both CTS2 output (JSON) and this REST service.
    • Is there an easier REST API to put on the top of CTS2?
  • There are current users of CTS2 REST service, so we need to make sure any API changes will have a similar format.
  • EntityDescription vs RDF label - how do we harmonize the data.
  • CTS2 is generic.  The NCI team is suggesting going to a more specific (RDF OWL) model for a thesaurus API.
    • Current SPRARQL REST calls to StarDog returns JSON (OWL2 model).

Decision Points:

  • Tracy requested from the LexEVS team: mapping to/from lexgrid↔OWL.
  • Kim will share with the Mayo team the output/format he has from SPRARQL REST calls to StarDog. 
  • Mayo team will see if anyone in our group has triple store expertise that may be able to answer questions from NCI.
 Tier Deployment - Update
  • Tier Deployment
    • Data deployment
  • 6.5.0.1.FINAL LexEVS Admin testing

Discussion Points:

Stage server is still in progress.  6.5.0 is the what the browser is running against. 6.5.0.1.Final is what is needed for loader. 

Decision Points:

CTRP Support

  • Updates

Discussion Points: URL's are evaluated for LexEVS to owl2 semantic mapping sense

Docker - Next Steps Discussion

Discussion Points:

  • lexevs-system-test Docker script is pulling Docker images from the internal NCI Nexus server. 
    • Working with systems team on configuring this withing Jenkins the server.
  • On Monday we discussed with the systems team what it would take create a lexevs deployable container as a prototype on a Dev server.
  • The systems team is a few months out on this work.
  • The Mayo team will start to design and develop Docker images with non-NCI specific software

    .

    Decision Points:

    Link to NCI Docker Hub:  https://hub.docker.com/u/cbiit/

    Mayo willing to help with any schema, modeling tasks as needed.  Readiness is the watch word. 

    Value Set Architecture

    • Update

    Discussion Points:

    • Working on miscellaneous issues on the value set workflow.
    • Moving toward replacing the hierarchy implementation.We will need to understand the current hierarchy structure and how it is handled in the browser.
      • We are stepping away from the external documents and creating a fully automated approach

    Decision Points:

    LexEVS External Users

    Discussion Points:  Brazilian academic user.  Not much feedback. 

    Decision Points:

    Craig to set up meeting with ASU and our NCI/LexEVS team.

    Team Absences

    Mayo Team

    • Cory - 6/19 - 6/23
    • Scott - 7/27 - 7/28, 7/31- 8/1
    • Craig -

    NCI

    • Tracy
    • Rob June 16,19
    • Kim
    • Larry - 6/23 - 6/29

    ...