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<strong>Applicable Releases:</strong> caArray 2.X
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caArray Usage
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genomic locations. Columns represent samples or experimental conditions. | Yes | No. Directly Import |
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What are MAGE-TAB Files?
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The term of "MAGE-TAB Files" (See an example)has been used to refer not only MAGE-TAB formatted files as summarized in table 1, but also files that are supported by MAGE-TAB parser mentioned in last section. To be more specific, MAGE-TAB files also include the third party's raw array data files, derived data files and array design files from array providers, as shown in the figure below. |
In summary, MAGE-TAB files refer to each other. Together they represent the complete experiment.
Building MAGE-TAB Formatted files
MAGE-TAB specification can be found at: MGED homepage.
To get start, you may generate a MAGE-TAB template file from EMBL-EBI's MAGE TAB site, or create your own IDF & SDRF files based on the MAGE-TAB documentation.
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