NIH | National Cancer Institute | NCI Wiki  

Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

Each line of the data file contains one record, is prefixed by the table name, and is comma delimited.

Note
titleImportant!

Use blank fields for those fields that are included in the CDUS standard but not used by the CTRP.

Code Block
languagenone
titleValid Record Formats and Field Sequence
COLLECTIONS,<Study_Identifier>,,,,,,,,,<Change_Code>
PATIENTS,<Study_Identifier>,<Study_Subject_Identifier>,<Zip_Code>,<Country_Code>,<Birth_Date>,<Gender>,<Ethnicity>,<Payment_Method>,<Subject_Registration_Date>,<Registering_Group_Identifier>,<Study_Site_Identifier>,,,,,,,,,,<Subject_Disease_Code>,,
PATIENT_RACES,<Study_Identifier>,<Study_Subject_Identifier>,<Race>

Note:  For additional information on the Data Elements required for Complete studies, go to Accrual Data Elements with CTRP-Accepted Values for Complete Trials. 

The following is an example of a Subject level accrual batch file for a study that has three study subjects, and one race per subject using CTRP accepted valid values. In the example below "Male", is used instead of a CDUS/OPEN accepted numeric value of "1".

Code Block
languagenone
titleExample Batch File
COLLECTIONS,"NCI-2011-03861",,,,,,,,,1
PATIENTS,"NCI-2011-03861",873222899999999,84124,US,196311,Male,Unknown,Private Insurance,20060809,CALGB,149280,,,,,,,,,,238.7,,
PATIENTS,"NCI-2011-03861",8732228,84124,US,196311,Male,Unknown,Private Insurance,20060809,CALGB,149280,,,,,,,,,,238.7,,
PATIENTS,"NCI-2011-03861",1,84124,US,196311,Male,Unknown,Private Insurance,20060809,CALGB,149280,,,,,,,,,,185.0,,
"PATIENT_RACES","NCI-2011-03861",8732228,White
"PATIENT_RACES","NCI-2011-03861",873222899999999,Asian
"PATIENT_RACES","NCI-2011-03861",1,White

The following is another example of a Subject level accrual batch file, accepted by CTRP, for the same study but using CDUS/OPEN accepted numeric codes instead of the text values used in the example above .

Code Block
languagenone
titleExample Batch File
COLLECTIONS,"NCI-2011-03861",,,,,,,,,1
PATIENTS,"NCI-2011-03861",873222899999999,84124,US,196311,1,9,1,20060809,CALGB,149280,,,,,,,,,,238.7,,
PATIENTS,"NCI-2011-03861",8732228,84124,US,196311,1,9,1,20060809,CALGB,149280,,,,,,,,,,238.7,,
PATIENTS,"NCI-2011-03861",1,84124,US,196311,1,9,1,20060809,CALGB,149280,,,,,,,,,,185.0,,
"PATIENT_RACES","NCI-2011-03861",8732228,01
"PATIENT_RACES","NCI-2011-03861",873222899999999,05
"PATIENT_RACES","NCI-2011-03861",1,01

The following is an example of a Partial level accrual batch file for a study that has two subjects, and only reporting the minimum data fields required for a Partial level accrual batch file (other accrual data fields are optional) 

Code Block
languagenone
titleExample Batch File
"COLLECTIONS","NCI-2018-03045",,,,,,,,,
"PATIENTS","NCI-2018-03045","L1",,,,,,,"20190101",,"WQ456",,,,,,,,,,,,
"PATIENTS","NCI-2018-03045","L2",,,,,,,"20110908",,"WQ456",,,,,,,,,,,,

Anchor
6136
6136

Include Page
Special Characters in Accrual Reporting - Include v4.4
Special Characters in Accrual Reporting - Include v4.4


ICD-O-3 Study Format for Topography Codes

For studies using ICD-O-3 codes, use the Subject Disease Code position for ICD-O-3 Topography and Morphology (which must include Histology and Behavior codes). When you use both Topography and Morphology codes, separate them by a semi-colon as per the example below.
Format:  site code; histology code
Code: C64.9;8000/3

Examples:

SDC Topography
PATIENTS,"NCI-2011-03861",8732228,84124,US,196311,1,9,1,20060809,CALGB,149280,,,,,,,,,,238.7,,
ICD-O-3 Topography and Morphology
PATIENTS,"NCI-2011-03861",8732228,84124,US,196311,1,9,1,20060809,CALGB,149280,,,,,,,,,,C64.9;8000/3,,