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Page History
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| Time | Item | Who | Notes |
|---|---|---|---|
| LUAD Acetylome data released last week and supports two publications, one of which uses the new IDs for PDC. | |||
| Scientific Committee: haven't heard from 2 people, but Mike MacCoss has reached out and internal discussions were held on how to organize the call. Proposing 1.5-2 hr. call. Topics: Data hosting, development efforts, findability, APIs. Short 15 presentations with ~10 min of time for feedback. Looking for feedback on agenda. Paul Rudnick volunteers to do section on CDAP output/APIs. Doodle poll to be sent out for times - targeting early to mid August. | |||
| CPTAC data portal migration: discuss where we stand and what steps are needed to make the migration happen. Same presentation as on Monday. CPTAC Download slide was added per category. 2019 and 2020 (up to July 13). Phase 2 and external data is most downloaded in 2019. Phase 3 data is up in downloads in 2020 compared to 2019. Methods studies in Phase 3 not included in PDC at this time. Question: what is priority for bringing these forward? Mike MacCoss thinks method data is valuable as benchmark by bioinformaticians. Previous priority was cancer cohorts (clinical), maybe need to increase priority on method data. Cost of downloads: $3K/month for 16TB of data/month. | |||
| went over next data sets and ongoing work. Submission template released. SBG coming to next call. |
