NIH | National Cancer Institute | NCI Wiki  

Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.
Comment: Removed "input" and "output" based on discussion in meeting today.
Note

This page is a work in progress.

The Inferencing - 2021-10-27 page describes how to generate predictions from a model asset collection (and optionally evaluate the model).

  • When doing so for generating predictions from an MT-CNN model, you can select a GDC manifest file (TXT) or a pathology report (TXT or PDF) as an input file.
  • Optional: If you want to evaluate the model with an output file, MoDaC accepts CSV files for that purpose. Make sure the number of rows of data in the output file for evaluating the model matches the number of rows of data in the inputfile for generating predictions. 

The following attachments provide examples:

...