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SYSTEMS
Systems

Discussion Points:

  • Status of migration on new QA tier.
    • Archive old server
  • Stage migration status
    • Not yet started
  • Systems new vendors
    • changes impacting EVS?
    • 2 Prod tickets pending for over a week for LexEVS
      • CTS2 deployed succesfully
      • Report Exporter not complete - is AWS so a different team?
  • Semantics URL to be applied to Stage tier - handed to other team, Chuck to chase downStardog license shift to new serverCuong

Decision Points:


LEXEVS UPDATES

LexEVS Sprint Status


Current Sprint - Sprint 203 (Jan 30 - Feb 13 2023)

16X237 Agile Development - Sprint Status#16X237AgileDevelopmentSprintStatus-Sprint203
  • LexEVS CTS2 Service - on Stage, Prod requested
  • Report Exporter - on Stage, Prod requested
  • Vue3 Updates for Report Exporter nearing completion
  • Working on updating browser for Spring 5 - on dev
  • Started working on update of vulnerable dependencies
  • Metrics and other reports due next week
Future Planning

Discussion Points:

 Planning for Mayo team in the coming fiscal year:

  • Java 8
    • implications
  • migration to 11
    • EOL Sep '23
    • Waiting for info on migration deadlines
    • Implications for Tomcat containers
    • JREs available on servers
  • EVS Compare
Technical Debt remediation

LexEVS Code Debt Refactoring

  • Do code inventory for Java migration
    • Work begun on implementation
    • Do code inventory for Java migration
    LoE work to be done - Mark to report
    • Need risk assessment of the work - what is the risk of NOT doing things
  • Vulnerable dependencies
  • Java 8 migration to 11
    • EOL Sep '23
    • Waiting for info on migration deadlines
    • Implications for Tomcat containers
    • JREs available on servers
  • Vulnerability remediation and general updates
  • Other dependencies

CTS2 Mapping/CTS2 Mapping/URI Resolver

Discussion Points:

  • On Stage.  QA verifiedTicket put in for ProdProd, verified

Decision Points:

caDSR Query

Have been asking for other standalone terminologies, expected that they will use CTS2

Statistics Dashboard

Discussion Points: 

Yearly report re-sentNeed 28 day report

  • Google analytics - Retiring GA and going to GA4
    • May need to only update GA, not applications. 
      • Need further experimentation, documentation
      • Per Kim - looks like scripts need to be updated from GA3 to GA4
    • No analytics being collected by EVS Explore
    • Add to Report Exporter and EVS Compare
      • EVS Exporter working
      • Create token for EVS Compare - though it is not ready to gather yet
    • TS to do paragraph on how to migrate

Decision Points:

Comparison/Mapping Tool

Discussion Points:

  • March timeframe
    • Specs document to be put together in March
    • Look at technical debt updates 
    • Java 11

Decision Points:

EVS transition to virtual machines

Discussion Points:

  • Server Migration 2021
    • QA2
      • We are waiting for approval to start using QA2 in earnest, will need to coordinate with team.
      QA
      • URLs repointed
    • Stage 
      • Instance of VM instantiated. Needs configuration. 
      • Blocker: Waiting to hear from Systems on what is needed to progress, if they have configuration information.
      • Followed by Prod then DataQA

Decision Points:

Report Exporter

Discussion Points:

  • Tomcat and Spring Vulnerability noted on the Report Exporter
    • Deployed on Stage
    • Request put in for Prod - ticket in, will follow up: NCI-RITM0415989 (Mark following up)
  • Working on update to Vue3 (JavaScript Framework). EVSREPEXP-451
    • ~ 2 month - Due: Mar 10 (end of sprint 305); on week 7 12 of estimated 16
    • master ticket: EVSREPEXP-442 - Migrate Vue.js version from 2.0 to 3.0
    • Description 8 -
      • On Dev and being regression tested
      • 3 different phases
        • Dependencies updated - complete
        • Squashing errors generated from update - complete
        • Unit testingtesting 
          • bug squashing from this - in progress
          • 8 or 9 issues left
          • Code detection issue requiring details page restructure
  • Look at updating to Java 11 - code inventory work
    • Code inventory complete. Ticket: EVSREPEXP-463

Decision Decision Points:

AWS Cloud to be in Separate Account

Discussion Points

  • No Response as of yet

Decision Points:

Team Absences


Mayo Team - Tracy off 16, 17

MSC -

Leidos - Mark off Feb 14-24

Systems - 


EVS SERVICE AND ARCHITECTURE GROUP UPDATES
EVS Service and Architecture Group

Discussion Points:

  • Remote API and URI Resolver retirement
    • Looking at 3 months - April timeframe 
    • Need an announcement sent out ahead of time - Draft sent

Decision Points:


DATA UPDATES
Data

Discussion Points: 

Flat file modified for PT and syn order

  • 23.01e started, being processedreleased - some issues, under review
  • monthly data next week

Decision Points:


BROWSER UPDATES

Browser

Discussion Points:

  • Nothing new for this group

Decision Points: 

  • Spring 5 browser version on Dev
    • properties extension requires update - in progress
    • Expected 2 weeks for app completion
    • Designing ideas for testing in absence of remote API
  • Expect requests from Oberon
  • SPARQL-EVS interface to be discussed off-line

Decision Points: 


QA UPDATES

QA

Discussion Points:  (see chart)

Decision Points: 

  • Regression on RestAPI done for 23.01e
  • Testing done on lastest RestAPI release
  • tag 1.7 EVS Rest and Explore being tested



TERMINOLOGIES LIFECYCLE TERMINOLOGIES LIFECYCLE REPORT

Terminology Updates and Schedule 

Discussion Points: 

Decision Points: : 

Mark Benson TPM UpdateMark Benson TPM Update

Priorities are :

  • lexevs vulnerabilities
  • lexevs java 11
  • lexevs-service vulnerabilites
  • lexevs-service java 11
  • lexevs-service-rest-docs vulnerabilities
    • lexevs-service-rest-docs java 11
    Checklist: LexEVS Code Inventory - Refactoring Checklist.xlsx (Sharepoint)


    LexEVS Spring Migration Progress



    Technical Debt Related Update

    Estimated Effort

    Status

    Ticket

    Code Inventory4 daysComplete
    Lexevs - update "easy" jars2 daysComplete
    Update ddlutils - research and design3 days
    In Progress
    Complete
    Update ddltils - implementations10 daysIn Progress
    Lexevs Unit testing2 days

    CTS2 lexevs-service vulnerability update2 days

    CTS2 unit testing2 days

    QA Lexevs / CTS2

    3 days



    Repair QA issues2 days

    Deployment Lexevs / CTS25 days (elapsed)

    Update LexEVS to Java 11 - research and design4 days

    LexEVS Java 11 implementation5 days

    lucene 9 - research and design8 days

    lucene 9 - implementation15 days

    LexEVS Java 11 unit testing3 days

    CTS2 lexevs-service Java 11 - research and design 3 days

    CTS2 lexevs-service Java 11 implementation3 days

    CTS2 unit testing2 days

    QA Lexevs / CTS2

    3 days



    Repair QA issues2 days

    Update Jenkins1 day

    Deployment Lexevs / CTS210 days (elapsed)

    lexevs-service-rest-docs vulnerability update design2 days

    lexevs-service-rest-docs vulnerability implementation4 days

    lexevs-service-rest-docs unit testing1 day

    lexevs-service-rest-docs QA

    1 day



    lexevs-service-rest-docs deployment4 days (elapsed)

    lexevs-service-rest-docs Java 11 design

    2 days



    lexevs-service-rest-docs Java 11 implementation3 days

    lexevs-service-rest-docs unit testing1 day

    lexevs-service-rest-docs QA

    1 day



    lexevs-system-test design4 days

    lexevs-system-test implementation6 days

    lexevs remaining dependency updates - design10 days

    lexevs remaining dependency updates - implementation20 days

    CTS2 remaining dependency updates - design1 day

    CTS2 remaining dependency updates - implementation3 days

    Unit testing2 days

    QA2 days

    Deployment5 days (elapsed)

    Total Effort (Approximately)104 days

    Technical Debt Related Update

    Estimated Effort

    Status

    Report Exporter vulnerabilities - design4 days
    Report Exporter vulnerabilities - implementation5 days
    Unit testing2 days
    QA2 days
    Deployment5 days (elapsed)

    ...

    01/23/23

    Vocabulary Name

    Local Name

    Version

    Arrival Date

    Loaded to data-qa DB

    Date to Stage

    Date to Production

    Vocabulary Name in LexBIG

    Short Name

    Version identifier

    Date the vocabulary arrived for processing

    		Has the vocabulary been loaded to the data-qa database?

    Approximate date the vocabulary version is scheduled to move to staging

    Approximate date the vocabulary version is scheduled to move to production

    NCI ThesaurusNCIt22.12d12/27/2022yes01/11/2301/17/23
    NCIt-HGNCNCIt-HGNCDec202212/27/2022yes01/11/2301/17/23
    SwissProtSwissProtDec202212/27/2022yes01/11/2301/17/23
    ChEBIChEBIv21701/12/23yes01/19/2301/23/23
    GOGOJan202301/12/23yes01/19/2301/23/23

    to production

    NCI ThesaurusNCIt23.01e01/31/2023yes02/09/232/10/23
    NCIt-ChEBINCIt-ChEBIJan202301/31/2023yes02/09/232/10/23
    NCIt-HGNCNCIt-HGNCJan202301/31/2023yes02/09/232/10/23
    SwissProtSwissProtJan202301/31/2023yes02/09/232/10/23
    ChEBIChEBI




    GOGO




    HGNCHGNCHGNCHGNCJan202301/12/23yes01/19/23




    QA Schedule and Status

    see QA Scheduling and Status

    ...