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Problem: When attempting to validate an Illumina Genotyping Processed Matrix SNP data TXT file based on the HumanHap550v3_A design in caArray, you may receive the following error message:

"1 data file(s) are in a format not currently supported for parsing. These files may only be included for validation when validating an SDRF that refers to the files."

Topic: caArray Usage

Release: caArray 2.0 and above

Date entered: 06/26/2011

Solution

SOLUTION: The Illumina SNP data file must be edited before it can be validated by caArray. Specifically, the data table header descriptions in the first row must be altered as follows:

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