NIH | National Cancer Institute | NCI Wiki  

Versions Compared

Old Version 7

changes.mady.by.user Unknown User (wileyal)

Saved on

compared with

New Version 8

changes.mady.by.user Unknown User (dilmanih)

Saved on

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

...

Release: caIntegrator 1.2 and above

Date entered: 03/23/2011

Answer

You can create a study without genomic data, but you cannot add genomic data to a caIntegrator study without a corresponding supported array platform. Currently, caIntegrator only supports following types of platforms: Affymatix Affymetrix Gene Expression, Affymatrix Affymetrix Copy Number, Agilent Gene Expression, and Agilent Copy Number. Please refer to the User Guide for the step-by-step instruction instructions on how to create a new platform.

To add a new platform, the array annotation file is required. For Affymatrix Affymetrix platforms, please refer to GeWorkbench025 for how to obtain the annotation file. For other platforms, Please please refer to the following resources:

...