BiomedGT Publishing procedure

 Prompt Prompt will be performed on the Protégé application on a (bi)weekly basis.  At the completion of this process, a baseline is exported for use in the next Prompt procedure.  On an approximately monthly basis, this baseline will be turned over to Operations for publication to LexBIG.  Note: LexBIG expects a ByCode version of the OWL file.  It is unclear at this point whether the baselines being created are ByName or ByCode.  If they are ByName, then we will need a process to convert them to ByCode.  The

The first step performed by Operations will be to run the baseline through a process to eliminate unpublishable properties and roles( example: Editor_Note).  Currently the OWL version of the TDE baseline is loaded into Protégé and classified, for purely QA purposes.  This is to check that the removal of roles did not create any classification issues.  Since we are going to classify the Ontylog output (below) this may no longer be necessary.  Currently

Currently there is a QA process which intakes the baseline, the previous monthly baseline, and the history export for the month.  The output is helpful in finding inconsistencies in the data and should be continued in some form for BiomedGT.  Some process will be needed to "clean" the history for processing.

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• A cumulative history for publication in LexBIG
• A monthly history showing all publishable history records for the cycle
• A monthly history highlighting only creations and retirements (including splits and merges) for use by caDSR The caDSR The baseline will need to be run through a process to generate an Ontylog formatted file for input into DTS, in support of caCORE 3.2.  It is undetermined whether we will be making this file available for download directly.

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