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Coding Scheme
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RRF File Name
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RRF Column Name
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RRF Definition
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NCI Meta only
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LexGrid Model Element
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Comments
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NA
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codingScheme.representsVersion
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No comments
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NA
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codingScheme.codingSchemeName
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hard coded in java file as "UMLS_SemNet"
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NA
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codingScheme.formalName
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hard coded in java file as "UMLS Semantic Network"
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NA
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codingScheme.defaultLanguage
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hard coded in java file as "en"
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NA
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codingScheme.approxNumConcepts
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hard coded in java file as
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NA
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codingScheme.entityDescription
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hard coded in java file as "The UMLS Semantic Network is one of three UMLS Knowledge Sources developed as part of the Unified Medical Language System project. The network provides a consistent categorization of all concepts represented in the UMLS Metathesaurus."
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license.txt
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NA
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codingScheme.copyright
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Read from license.txt file or hard coded reference in java file
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NA
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codingScheme.codingSchemeURI
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:title} {anchor:ContentsofthisPage}{panel:title=Contents of this Page} {toc:minLevel=2} {panel} h2. Coding Scheme || _RRF File Name_ || _RRF Column Name_ || _RRF Definition_ || _NCI Meta only_ || _LexGrid Model Element_ || _Comments_ || | | | | NA | codingScheme.representsVersion | No comments \\ | | | | | NA | codingScheme.codingSchemeName | hard coded in java file as "UMLS_SemNet" | | | | | NA | codingScheme.formalName | hard coded in java file as "UMLS Semantic Network" | | | | | NA | codingScheme.defaultLanguage | hard coded in java file as "en" | | | | | NA | codingScheme.approxNumConcepts | hard coded in java file as | | | | | NA | codingScheme.entityDescription | hard coded in java file as "The UMLS Semantic Network is one of three UMLS Knowledge Sources developed as part of the Unified Medical Language System project. The network provides a consistent categorization of all concepts represented in the UMLS Metathesaurus." | | license.txt | | | NA | codingScheme.copyright | Read from license.txt file or hard coded reference in java file | | | | | NA | codingScheme.codingSchemeURI | hard coded in java file as "urn:lsid:nlm.nih.gov:semnet" |
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NA
| | | | | NA | codingScheme.relations.containerName |
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| hard coded in java file as |
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NA
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codingScheme.localNameList
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No comments
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NA
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codingScheme.localNameList.
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hard coded in java file as "UMLS_SemNet"
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NA
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codingScheme.localNameList
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No comments
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NA
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codingScheme.localNameList.
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No comments
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NA
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codingScheme.source
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No comments
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NA
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codingScheme.source.content
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No comments
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NA
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codingScheme.localNameList
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No comments
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NA
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codingScheme.localNameList.
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No comments
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NA
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codingScheme.localNameList
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No comments
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NA
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codingScheme.localNameList.
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No comments
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NA
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codingScheme.localNameList
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No comments
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NA
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codingScheme.localNameList.
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No comments
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NA
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codingScheme.localNameList
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No comments
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NA
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codingScheme.localNameList.
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No comments
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NA
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mappings.supportedFormat
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No comments
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NA
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mappings.supportedFormat.localId
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hard coded in java file as "text/plain"
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NA
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mappings.supportedFormat.uri
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"relations" | | | | | \\ | | | | | | | NA | codingScheme.localNameList | No comments | | | | | NA | codingScheme.localNameList. | hard coded in java file as "UMLS_SemNet" | | | | | NA | codingScheme.localNameList | No comments | | | | | NA | codingScheme.localNameList. | No comments | | | | | NA | codingScheme.source | No comments | | | | | NA | codingScheme.source.content | No comments | | | | | NA | codingScheme.localNameList | No comments | | | | | NA | codingScheme.localNameList. | No comments | | | | | NA | codingScheme.localNameList | No comments | | | | | NA | codingScheme.localNameList. | No comments | | | | | NA | codingScheme.localNameList | No comments | | | | | NA | codingScheme.localNameList. | No comments | | | | | NA | codingScheme.localNameList | No comments | | | | | NA | codingScheme.localNameList. | No comments | | | | | NA | mappings.supportedFormat | No comments | | | | | NA | mappings.supportedFormat.localId | hard coded in java file as "text/plain" | | | | | NA | mappings.supportedFormat.uri | hard coded in java file as "urn:oid:2.16.840.1.113883.6.10:text_plain" |
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NA
| | | | | NA | mappings.supportedAssociation |
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| No comments |
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SRDEF
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RL
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NA
| | SRDEF | RL | | NA | mappings.supportedAssociation.localId |
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| No |
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NA
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mappings.supportedContext
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No comments
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NA
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mappings.supportedSource
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No comments
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NA
comments | | | | | NA | mappings.supportedContext | No comments | | | | | NA | mappings.supportedSource | No comments | | | | | NA | mappings.supportedSource.localId |
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| hard coded in java file as "NLM" |
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NA
| | | | | NA | mappings.supportedSource.uri |
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| hard coded in java file as "urn:lsid:nlm.nih.gov" |
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NA
| | | | | NA | mappings.supportedHierarchy |
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| No |
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NA
comments | | | | | NA | mappings.supportedHierarchy.localId |
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| hard coded in java file as "is_a" |
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NA
| | | | | NA | mappings.supportedHierarchy.isForwardNavigable |
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| hard coded as "true" |
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NA
| | | | | NA | mappings.supportedHierarchy.rootCode |
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| hard coded as "@" |
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NA
| | | | | NA | mappings.supportedHierarchy.associationList |
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| hard coded in java file as "hasSubtype" |
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NA
| | | | | NA | mappings.supportedAssociationQualifier |
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| No comments |
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SRFLD
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COL
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NA
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mappings.supportedProperty
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No comments
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NA
| | SRFLD | COL | | NA | mappings.supportedProperty | No comments | | | | | NA | mappings.supportedProperty.localId |
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| If SRDEF appears in the FIL column then this is treated a potential supported property and is entered in supported properties as |
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NA
such. | | | | | NA | mappings.supportedProperty.uri |
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| hard coded in java file as |
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NA
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mappings.supportedLanguage
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No comments
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NA
"" | | | | | NA | mappings.supportedLanguage | No comments | | | | | NA | mappings.supportedLanguage.localId |
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| hard coded in java file as "en" |
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NA
| | | | | NA | mappings.supportedLanguage.uri |
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| hard coded in java file as "urn:oid:2.16.840.1.113883.6.84:en" |
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NA
| | | | | NA | mappings.supportedCodingScheme |
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| No |
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NA
comments | | | | | NA | mappings.supportedCodingScheme.localId |
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| hard coded in java file as "UMLS_SemNet" |
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NA
| | | | | NA | mappings.supportedCodingScheme.uri |
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| hard coded in java file as "urn:lsid:nlm.nih.gov:semnet" |
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NA
| | | | | NA | mappings.supportedRepresentationalForm |
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| No |
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NA
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mappings.supportedConceptStatus
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No comments
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NA
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mappings.supportedPropertyLink
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No comments
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NA
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mappings.supportedPropertyQualifier
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No comments
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NA
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mappings.supportedDataType
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No comments
Entities
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RRF File Name
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RRF Column Name
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RRF Definition
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NCI Meta only
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LexGrid Model Element
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Comments
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SRDEF
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UI
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NA
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Entity.entityCode
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No comments
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SRDEF
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STY/RL
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NA
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Entity.enitityDescription(inheritance path Entity->versionableAndDescribable)
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No comments
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NA
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Entity.Property
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No comments
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SRDEF
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NH
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NA
comments | | | | | NA | mappings.supportedConceptStatus | No comments | | | | | NA | mappings.supportedPropertyLink | No comments | | | | | NA | mappings.supportedPropertyQualifier | No comments | | | | | NA | mappings.supportedDataType | No comments | h2. Entities || _RRF File Name_ || _RRF Column Name_ || _RRF Definition_ || _NCI Meta only_ || _LexGrid Model Element_ || _Comments_ || | SRDEF | UI | | NA | Entity.entityCode | No comments | | SRDEF | STY/RL | | NA | Entity.enitityDescription(inheritance path Entity->versionableAndDescribable) | No comments | | | | | NA | Entity.Property | No comments | | SRDEF | NH | | NA | Entity.Property.text.content |
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| No |
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NA
comments | | | | | NA | Entity.Property.value.text.dataType |
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| hard coded in java file as "text/plain" |
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NA
| | | | | NA | Entity.Property.propertyName |
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| hard coded in java file as "NH" |
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NA
| | | | | NA | Entity.Property.propertyId |
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| Generated value for property using "P" concatenated with a steadily incremented numerical |
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NA
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Entity.presentation
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No comments
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NA
value. | | | | | NA | Entity.presentation | No comments | | | | | NA | Entity.presentation.propertyName (inherited from Property) |
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| Hard coded in java file as "STY/RL" or "ABR" |
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NA
| | | | | NA | Entity.presentation.propertyId |
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| Generated value for property using "P" concatenated with a steadily incremented numerical value. |
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SRDEF
| | SRDEF | STY/RL, |
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NA
ABR | | NA | concept.presentation.text.content |
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| No |
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NA
comments | | | | | NA | Entity.presentation.value.text.dataType |
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| hard coded in java file as "text/plain" |
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NA
| | | | | NA | Entity.presentation.isPreferred |
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| hard coded in java file as |
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NA
true. | | | | | NA | Entity.definition.propertyName (inherited from Property) |
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| Hard coded in java file as "DEF" |
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NA
| | | | | NA | concept.definition.propertyId |
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| Generated value for property using "P" concatenated with a steadily incremented numerical value. |
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SRDEF
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DEF
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NA
| | SRDEF | DEF | | NA | Entity.definition.text.content |
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| No |
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NA
comments | | | | | NA | Entity.definition.value.text.dataType |
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| hard coded in java file as "text/plain" |
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NA
| | | | | NA | Entity.definition.isPreferred |
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| hard coded in java file as |
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NA
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Entity.comment
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No comments
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SRDEF
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EX
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NA
true. | | | | | NA | Entity.comment | No comments | | SRDEF | EX | | NA | Entity.comment.propertyName (inherited from Property) |
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| Hard coded in java file as "EX" |
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NA
| | | | | NA | Entity.comment.text.content |
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NA
| | | | | | NA | Entity.comment.value.text.dataType |
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| hard coded in java file as "text/plain" |
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NA
| | | | | NA | Entity.comment.propertyId |
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| Generated value for property using "P" concatenated with a steadily incremented numerical |
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NA
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Entity.instruction
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No comments
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NA
value. | | | | | NA | Entity.instruction | No comments | | | | | NA | Entity.instruction.propertyName (inherited from Property) |
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| Hard coded in java file as "UN" |
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SRDEF
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UN
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NA
| | SRDEF | UN | | NA | Entity.instruction.text.content |
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| No |
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NA
comments | | | | | NA | Entity.instruction.value.text.dataType |
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| hard coded in java file as "text/plain" |
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NA
| | | | | NA | Entity.instruction.propertyId |
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| Generated value for property using "P" concatenated with a steadily incremented numerical value. |
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Relations
RRF File Name | RRF Column Name | RRF Definition | NCI Meta only | LexGrid Model Element | Comments |
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SRSTR | RL |
| NA | AssociationPredicate.associationName | In the case of RL value is "isa" the id is hard coded to hasSubtype. The direction of the association is also reversed |
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| NA | AssociationEnity.isTransitive | hard coded to true if the value of RL is "isa" |
SRSTR | RL |
| NA | AssociationEntity.forwardName | Reversed when value of RL is "isa" |
SRSTR | STY/RL |
| NA | AssociationSource.sourceEntityCode | Reversed when value of RL is "isa" |
SRSTR | STY/RL |
| NA | AssociationTarget.targetEntityCode | No comments |
SRDEF | RIN |
| NA | AssociationEntity.reverseName | No comments |
SRDEF | DEF |
| NA | AssociationEntity.entityDescription.content (inheritance path for entityDescription is Entity->versionableAndDescribable) | When SRDEF value RT is "RL" |
SRSTRE1 | UI/STY(first argument) |
| NA | AssociationSource.sourceEntityCode | Reversed when value of RL is "isa" |
SRSTRE1 | UI/STY(2nd argument) |
| NA | AssociationTarget.targetEntityCode | Reversed when value of RL is "isa" |
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h2. Relations
|| _RRF File Name_ || _RRF Column Name_ || _RRF Definition_ || _NCI Meta only_ || _LexGrid Model Element_ || _Comments_ ||
| SRSTR | RL | | NA | AssociationPredicate.associationName | In the case of RL value is "isa" the id is hard coded to hasSubtype. The direction of the association is also reversed |
| | | | NA | AssociationEnity.isTransitive | hard coded to true if the value of RL is "isa" |
| SRSTR | RL | | NA | AssociationEntity.forwardName | Reversed when value of RL is "isa" |
| SRSTR | STY/RL | | NA | AssociationSource.sourceEntityCode | Reversed when value of RL is "isa" |
| SRSTR | STY/RL | | NA | AssociationTarget.targetEntityCode | No comments \\ |
| SRDEF | RIN | | NA | AssociationEntity.reverseName | No comments \\ |
| SRDEF | DEF | | NA | AssociationEntity.entityDescription.content (inheritance path for entityDescription is Entity->versionableAndDescribable) | When SRDEF value RT is "RL" |
| SRSTRE1 | UI/STY(first argument) | | NA | AssociationSource.sourceEntityCode | Reversed when value of RL is "isa" |
| SRSTRE1 | UI/STY(2nd argument) | | NA | AssociationTarget.targetEntityCode | Reversed when value of RL is "isa" |
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