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h2. OWL: RDF Schema Features

|| OWL Mapping - Protégé (New) \\
OWL Element || LexGrid || Comments ||
| owl:ontology | codingScheme | No comments \\ |
| xml:lang | codingScheme.defaultLanguage | Default is \'en\' |
| dc:title | codingScheme.formalName | No comments |
| rdfs:label | codingScheme.localName | No comments |
| URI | codingScheme.registeredName | No comments |
| owl:versionInfo | codingScheme.representsVersion | Default is \'UNASSIGNED\' |
| dc:rights | codingScheme.copyright | No comments |
| owl:Class (Thing, Nothing) | entity | No comments |
| rdf:ID | entity.entityCode | No comments |
| | entity.isActive | Hard coded as \"Active\" |
| | entity.isAnonymous | No comments |
| rsfs:label | entity.entityDescription | No comments |
| | entity.presentation | No comments |
| rdf:comment | entity.comment | No comments |
| rdfs:subClassOf | associationPredicate & associationEntity | No comments |
| | associationPredicate.associationName = \"subClassOf\" | No comments |
| | associationEntity.entityCode = \"subClassOf\" | No comments |
| | associationEntity.forwardName = \"subClassOf\" | No comments |
| | associationEntity.isNavigable = \"true\" | No comments |
| | associationEntity.isTransitive=\"true\" | No comments |
| | | |
| rdf:Property (ObjectProperty/DatatypeProperty) | associationPredicate.associationName = \"objectProperty/datatypeProperty\" | An association between two classes |
| | associationEntity.propertyName  = \"type\" | No comments |
| | associationEntity.propertyValue = \"objectProperty/datatypeProperty\" | No comments |
| | | No comments |
| | | No comments |
| rdfs:subPropertyOf | associationPredicate & associationEntity | No comments |
| | associationPredicate.associationName = \"subPropertyOf\" | No comments |
| | associationEntity.entityCode = \"subPropertyOf\" | No comments |
| | associationEntity.forwardName = \"subPropertyOf\" | No comments |
| | associationEntity.isNavigable = \"true\" | No comments |
| | associationEntity.isTransitive=\"true\" | No comments |
| | | |
| rdfs:domain | associationPredicate & associationEntity | No comments |
| | associationPredicate.associationName = \"domain\" | No comments |
| | associationEntity.entityCode = \"domain\" | No comments |
| | associationEntity.forwardName = \"domain\" | No comments |
| | associationEntity.isNavigable = \"true\" | No comments |
| | associationEntity.isTransitive=\"true\" | No comments |
| | | |
| rdfs:range | associationPredicate & associationEntity | No comments |
| | associationPredicate.associationName = \"range\" | No comments |
| | associationEntity.entityCode = \"range\" | No comments |
| | associationEntity.forwardName = \"range\" | No comments |
| | associationEntity.isNavigable = \"true\" | No comments |
| | associationEntity.isTransitive=\"false\" | No comments |
| | | No comments |
| Individual | entity | No comments |
| | entity.EntityType = \"instance\" |

h2. OWL: (In)Equality

|| OWL Mapping - Protégé (6.0) \\
OWL Element || LexGrid || Comments ||
| owl:equivalentClass | associationPredicate & associationEntity | No comments \\ |
| | associationPredicate.associationName = \"equivalentClass\" | No comments |
| | associationEntity.entityCode = \"equivalentClass\" | No comments |
| | associationEntity.forwardName = \"equivalentClass\" | No comments |
| | associationEntity.isNavigable = \"true\" | No comments |
| | associationEntity.isTransitive=\"true\" | No comments |
| | associationEntity.reverseName=\"equivalentClass\" | No comments |
| | | No comments |
| owl:equivalentProperty | associationPredicate & associationEntity | No comments |
| | associationPredicate.associationName = \"equivalentProperty\" | No comments |
| | associationEntity.entityCode = \"equivalentProperty\" | No comments |
| | associationEntity.forwardName = \"equivalentProperty\" | No comments |
| | associationEntity.isNavigable = \"true\" | No comments |
| | associationEntity.isTransitive=\"true\" | No comments |
| | associationEntity.reverseName=\"equivalentProperty\" | No comments |
| | | |
| owl:sameAs | associationPredicate & associationEntity | No comments |
| | associationPredicate.associationName = \"sameAs\" | No comments |
| | associationEntity.entitycode = \"sameAs\" | No comments |
| | associationEntity.forwardName = \"sameAs\" | No comments |
| | associationEntity.isNavigable = \"true\" | No comments |
| | associationEntity.isTransitive=\"true\" | No comments |
| | associationEntity.reverseName=\"sameAs\" | No comments |
| | | |
| owl:differentFrom | associationPredicate & associationEntity | No comments |
| | associationPredicate.associationName = \"differentFrom\" | No comments |
| | associationEntity.entityCode = \"differentFrom\" | No comments |
| | associationEntity.forwardName = \"differentFrom\" | No comments |
| | associationEntity.isNavigable = \"true\" | No comments |
| | associationEntity.isTransitive=\"true\" | No comments |
| | associationEntity.reverseName= \"differentFrom\" | No comments |
| | | |
| owl:AllDifferent | associationPredicate & associationEntity | No comments |
| | associationPredicate.associationName = \"AllDifferent\" | No comments |
| | associationEntity.entityCode = \"AllDifferent\" | No comments |
| | associationEntity.forwardName = \"AllDifferent\" | No comments |
| | associationEntity.isNavigable = \"true\" | No comments |
| | associationEntity.isTransitive=\"true\" | No comments |
| | associationEntity.reverseName= \"AllDifferent\" | No comments |

h2. OWL: Property Characteristics

|| OWL Mapping - Protégé (6.0) \\
OWL Element || LexGrid || Comments ||
| owl:inverseOf | associationPredicate & associationEntity | No comments\\ |
| | associationPredicate.associationName = \"inverseOf\" | No comments |
| | associationEntity.entitycode = \"inverseOf\" | No comments |
| | associationEntity.forwardName = \"inverseOf\" | No comments |
| | associationEntity.isNavigable = \"true\" | No comments |
| | associationEntity.isTransitive=\"true\" | No comments |
| | associationEntity.reverseName=\"inverseOf\" | No comments |
| | | |
| owl:TransitiveProperty | associationEntity.propertyName = \"type\" | No comments |
| | associationEntity.propertyValue = \"transitiveProperty\" | No comments |
| owl:SymmetricProperty | associationEntity.propertyName = \"type\" | No comments |
| | associationEntity.propertyValue = \"symmetricProperty\" | No comments |
| owl:InverseFunctionalProperty | associationEntity.propertyName = \"type\" | No comments |
| | associationEntity.propertyValue = \"inverseFunctionalProperty\" | No comments |
| owl:FunctionalProperty | associationEntity.propertyName = \"type\" | No comments |
| | associationEntity.propertyValue = \"functionalProperty\" | No comments |

h2. OWL: Property Restrictions

|| OWL Mapping - Protégé (6.0) \\
OWL Element || LexGrid || Comments ||
| owl:Restriction | associationEntity & associationSource/associationTarget | Create  an anonymous entity for the restriction. Note: if the restriction is  under an intersectionOf, system creates an anonymous class for  intersectionOf which contains the restriction |
| | associationEntity.entityCode starts with \"@\" | System generated code |
| | associationEntity.isActive = true | No comments |
| | associationEntity.isAnonymous = true | Hardcoded \"True\" |
| | associationSource.entityCode starts with \"@\" | System generated code |
| | associationTarget.entityCode starts with \"@\" | System generated code |
| | | No comments |
| owl:onProperty | associationPredicate | Use to define from associationSource to associationTarget |
| | | |
| owl: allValuesFrom | associationEntity.entityDescription | String of only values |
| | associationEntity.presentation.propertyId | Generated value for property textual presentation using \"P\" concatenated with a steadily incremented numerical value. |
| | associationEntity.presentation.propertyName | Hardcoded \"label\" |
| | associationEntity.presentation.isPreferred = true | Hardcoded \"true\" |
| | associationEntity.presentation.text | String of only values |
| | associationTarget.associationQualifier = \"allValueFrom\" | No comments |
| | | |
| owl: someValuesFrom | associationEntity.entityDescription | String of some values |
| | associationEntity.presentation.propertyId | Generated value for property textual presentation using \"P\" concatenated with a steadily incremented numerical value. |
| | associationEntity.presentation.propertyName | Hardcoded \"textualPresentation\" |
| | associationEntity.presentation.isPreferred = true | Hardcoded \"true\" |
| | associationEntity.presentation.text | String of someValuesFrom values |
| | associationTarget.associationQualifier = \"someValuesFrom\" | No comments |
| | | |
| owl:intersectionOf | associationEntity & associationSource/associationTarget | Create  an anonymous entity for the restriction. Note: if the restriction is  under an intersectionOf, system creates an anonymous class for  intersectionOf which contains the restriction |
| | associationEntity.entityCode starts with \"@\" | System generated code |
| | associationEntity.isActive = true | No comments |
| | associationEntity.isAnonymous = true | Hardcoded \"True\" |
| | associationEntity.entityDescription | String of intersectionOf values (ie. Pizza and not VegetarianPizza) |
| | associationEntity.presentation.propertyId | Generated value for property textual presentation using \"P\" concatenated with a steadily incremented numerical value. |
| | associationEntity.presentation.propertyName | Hardcoded \"textualPresentation\" |
| | associationEntity.presentation.isPreferred = true | Hardcoded \"true\" |
| | associationEntity.presentation.text | String of intersectionOf values (ie. Pizza and not VegetarianPizza) |
| | associationEntity.conceptProperty.propertyId | Generated value for property using \"P\" concatenated with a steadily incremented numerical value. |
| | associationEntity.conceptProperty.propertyName = type | Hardcoded \"type\" |
| | associationEntity.conceptProperty.text = \"owl:intersectionOf\" | |
| | associationSource.entityCode starts with \"@\" | System generated code |
| | associationTarget.entityCode starts with \"@\" | System generated code |
| | | |
| UnionOf | associationEntity & associationSource/associationTarget | No comments |
| | associationEntity.entitycode starts with \"@\" | System generated code |
| | associationEntity.isActive = true | No comments |
| | associationEntity.isAnonymous = true | No comments |
| | associationEntity.entityDescription | String of Union of values (ie. MozzarellaTopping or MushroomTopping or TomatoTopping) |
| | associationEntity.presentation.propertyId | Generated value for property textual presentation using \"P\" concatenated with a steadily incremented numerical value. |
| | associationEntity.presentation.propertyName | Hardcoded \"textualPresentation\" |
| | associationEntity.presentation.isPreferred = true | Hardcoded \"true\" |
| | associationEntity.presentation.text | String of intersectionOf values (ie. Pizza and not VegetarianPizza) |
| | associationEntity.conceptProperty.propertyId | Generated value for property using \"P\" concatenated with a steadily incremented numerical value. |
| | associationEntity.conceptProperty.propertyName = type | Hardcoded \"type\" |
| | associationEntity.conceptProperty.text = \"owl:unionOf\" | No comments |
| | associationSource.entityCode starts with \"@\" | System generated code |
| | associationTarget.entityCode starts with \"@\" | System generated code |
| | | |
| owl:complementOf | associationPredicate | associationPredicate.associationName = \"complementOf\" |
| owl:oneOf | associationEntity.entityDescription | String of oneOf values |
| | associationEntity.presentation.propertyId | Generated value for property textual presentation using \"P\" concatenated with a steadily incremented numerical value. |
| | associationEntity.presentation.propertyName | Hardcoded \"textualPresentation\" |
| | associationEntity.presentation.isPreferred = true | Hardcoded \"true\" |
| | associationEntity.presentation.text | String of oneOf values |
| | associationEntity.conceptProperty.propertyId | Generated value for property using \"P\" concatenated with a steadily incremented numerical value. |
| | associationEntity.conceptProperty.propertyName = type | Hardcoded \"type\" |
| | associationEntity.conceptProperty.text = \"owl:intersectionOf\" | No comments |
| | | |
| owl:hasValue | associationTarget.associationQualifier=\"owl:hasValue\" | No comments |
| | associationData.value | eg. if the type is int, associationData has the value |
| | | |
| owl:minCardinality | associationEntity.entityDescription | String of minCardinality Values (ie.  (hasTopping min 3) and Pizza) |
| | associationEntity.presentation.propertyId | Generated value for property textual presentation using \"P\" concatenated with a steadily incremented numerical value. |
| | associationEntity.presentation.propertyName | Hardcoded \"textualPresentation\" |
| | associationEntity.presentation.isPreferred = true | Hardcoded \"true\" |
| | associationEntity.presentation.text | String of minCardinality Value (ie.  (hasTopping min 3) and Pizza) |
| | associationEntity.conceptProperty.propertyId | Generated value for property using \"P\" concatenated with a steadily incremented numerical value. |
| | associationEntity.conceptProperty.propertyName = type | Hardcoded \"type\" |
| | associationEntity.conceptProperty.text = \"owl:intersectionOf\" | No comments |
| | associationTarget.associationQualifier = \"owl:minCardinality\" | No comments |
| | associationData.value | eg. if the type is int, associationData has the value |
| | | |
| owl:maxCardinality | associationEntity.entityDescription | String of maxCardinality Values (ie.  (hasTopping max 2) and Pizza) |
| | associationEntity.presentation.propertyId | Generated value for property textual presentation using \"P\" concatenated with a steadily incremented numerical value. |
| | associationEntity.presentation.propertyName | Hardcoded \"textualPresentation\" |
| | associationEntity.presentation.isPreferred = true | Hardcoded \"true\" |
| | associationEntity.presentation.text | String of maxCardinality Values (ie.  (hasTopping max 2) and Pizza) |
| | associationEntity.conceptProperty.propertyId | Generated value for property using \"P\" concatenated with a steadily incremented numerical value. |
| | associationEntity.conceptProperty.propertyName = type | Hardcoded \"type\" |
| | associationEntity.conceptProperty.text = \"owl:intersectionOf\" | No comments |
| | associationTarget.associationQualifier = \"owl:maxCardinality\" | No comments |
| | associationData.value | eg. if the type is int, associationData has the value |
| | | |
| owl:cardinality | associationEntity.entityDescription | String of cardinality Values |
| | associationEntity.presentation.propertyId | Generated value for property textual presentation using \"P\" concatenated with a steadily incremented numerical value. |
| | associationEntity.presentation.propertyName | Hardcoded \"textualPresentation\" |
| | associationEntity.presentation.isPreferred = true | Hardcoded \"true\" |
| | associationEntity.presentation.text | String of cardinality Values |
| | associationEntity.conceptProperty.propertyId | Generated value for property using \"P\" concatenated with a steadily incremented numerical value. |
| | associationEntity.conceptProperty.propertyName = type | Hardcoded \"type\" |
| | associationEntity.conceptProperty.text = \"owl:intersectionOf\" | No comments |
| | associationTarget.associationQualifier = \"owl:cardinality\" | No comments |
| | associationData.value | eg. if the type is int, associationData has the value |
| | | |
| owl:disjointWith | associationPredicaet | association.id = \"disjointWith\" |

h2. OWL: Annotation Property

|| OWL Mapping - Protégé (6.0) \\
OWL Element || LexGrid || Comments ||
| rdfs:label | Presentation | No comments |
| | entity.presentation.propertyId | Generated value for property textual presentation using \"P\" concatenated with a steadily incremented numerical value. |
| | entity.presentation.propertyName = \"textualPresentation\" | Hardcoded \"textualPresentation\" |
| | entity.presentation.isPreferred = true | Hardcoded \"true\" |
| | entity.presentation.text | Value of rdfs:label |
| | | |
| rdfs:comment | Comment | No comments |
| | entity.comment.propertyId | Generated value for property textual presentation using \"P\" concatenated with a steadily incremented numerical value. |
| | entity.comment.propertyName = \"comment\" | Hardcoded \"comment\" |
| | entity.presentation.text | Value of rdfs:comment |
| | | |
| rdfs:seeAlso | entityProperty | No comments |
| rdfs:isDefinedBy | entityProperty | No comments |

h2. OWL: Versioning

|| OWL Mapping - Protégé (6.0) \\
OWL Element || LexGrid || Comments ||
| owl:versionInfo | codingScheme.representsVersion | No comments |
| priorVersion | | Not Mapped |
| backwardCompatibleWith | | Not Mapped |
| owl:incompatibleWith | associationPredicate & associationEntity | No comments |
| | associationPredicate.associationName = \"imcompatibleWith\" | No comments |
| | associationEntity.entityCode = \"incompatibleWith\" | No comments |
| | associationEntity.forwardName = \"incompatibleWith\" | No comments |
| | associationEntity.isNavigable = \"true\" | No comments |
| | associationEntity.isTransitive=\"true\" | No comments |
| | associationEntity.reverseName=\"incompatibleWith\" | No comments |
| DeprecatedClass | Concept attribute setIsActive = false | Not Mapped |
| DeprecatedProperty | | Not Mapped |

h2. Legacy Complex Properties Mapping

|| tag || presentation || source || represenational form || qualifier || model element || value column name || model element ||
| | | | | | | | |
| go-term | x | | | | | propertyValue | |
| go-id | | | | x | propertyQualifierId | val1 | PropertyQualifier attribute content? |
| go-source | | | | x | propertyQualifierId | val1 | PropertyQualifier attribute content? |
| source-date | | | | x | propertyQualifierId | val1 | PropertyQualifier attribute content? |
| | | | | | | | |
| term-name | x | | | | | propertyValue | |
| term-group | | | x | | | representationalForm | property attribute |
| term-source | | x | | | | attributeValue | source |
| | | | | | | | |
| def-source | | x | | | | attributeValue | source |
| def-definition | x | | | | | propertyValue | definition |
| Definition_Review_Date | | | | x | propertyQualifierId | val1 | PropertyQualifier attribute content? |
| Definition_Reviewer_Name | | | | x | propertyQualifierId | val1 | PropertyQualifier attribute content? |
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