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|| OBO Class || OBO Entity || LexGrid Model Element || Notes ||
| Document Header | format-version | None | Not mapped. |
| Document Header | data-version | CodingScheme.representsVersion | Creates a codingSchemeVersion and SystemRelease record. If not specified, then hard coded "UNASSIGNED" |
| Document Header | version | CodingScheme.representsVersion | Deprecated - use data-version if present. |
| Document Header | date | None | Not mapped. |
| Document Header | saved-by | None | Ignored but included if contained in the remark entity. |
| Document Header | auto-generated-by | None | Ignored but included if contained in the remark entity. |
| Document Header | subsetdef | None | Not mapped. |
| Document Header | import | None | Deprecated - Imports are used to assemble a larger document from smaller. |
| Document Header | typeref | None | Deprecated. |
| Document Header | synonymtypedef | None | Not mapped. |
| Document Header | idspace | None | Not mapped.The idspace is a triple - localName, URN and description. |
| Document Header | default-relationship-id-prefix | None | Not mapped. |
| Document Header | id-mapping | CodingScheme.supportedAssociation | This  is more generalized than the LexGrid model, as it supports mapping  between \*any\* id's.  Note that its primary purpose, however, is to  handle supportedAssociation. |
| Document Header | remark | CodingScheme.entityDescription | Will combine multiple remark entities into the entityDescription. |
| Document Header | default-namespace | codingScheme.codingSchemeName | Will use default-namespace if provided;  otherwise will use filename without the extension. |
| Document Header | default-namespace | codingScheme.formalName | Will use default-namespace if provided;  otherwise will use filename without the extension. |
| Document Header | default-namespace | codingScheme.codingSchemeURI | Combination  of "urn:lsid:bioontology.org:" and if provided, the value in  "default-namespace"; but if not will use filename without the extension. |
| | | codingScheme.defaultLanguage | Hardcoded "en" |
| | | codingScheme.isNative | Hardcoded "true" |
| Stanza | id | Entity.entityCode | No notes\\ |
| Stanza | name | Entity.entityDescription | No notes |
| | | Entity.presentation\['textualPresentation'\].text | No notes |
| | | Entity.presentation\['textualPresentation'\].isPreferred = true | No notes |
| Stanza | alt_id | Entity.property.property="alt_id" | No notes |
| | | Entity.property\['alt_id'\].propertyId | No notes |
| | | Entity.property\['alt_id'\].text | No notes |
| Stanza | is_anonymous | Entity.isAnonymous = true | No notes |
| Stanza | is_obsolete | Entity.isActive = false | No notes |
| Stanza | def | Entity.definition | No notes |
| | | Entity.definition.isPreferred = true | No notes |
| Stanza | def.dbxref | None | See dbxref |
| Stanza | comment | Entity.comment.text | No notes\\ |
| Stanza | subset | property\[subset tag\] | See subsetdef |
| Stanza | syonym | presentation\['textualPresentation'\].text | No notes |
| Stanza | synonym.scope | presentation\['textualPresentation'\].degreeOfFidelity | No notes |
| Stanza | synonym.type | presentation\['textualPresentation'\].representationalForm | No notes |
| Stanza | synonym.dbxref | (see dbxref) | No notes |
| Stanza | exact_synonym | None | See synonym |
| Stanza | narrow_synonym | None | See synonym |
| Stanza | broad_synonym | None | See synonym |
| Stanza | xref | Property.\['xref'\] | No notes\\ |
| Stanza | xref_analog | None | See synonym |
| Stanza | xref_unk | None | No notes\\ |
| Stanza | is_a | AssociationPredicate.\['is_a'\] | Reverse of the source and target. |
| Stanza | is_a.namespace | None | If present, the supplied namespace becomes the owning "codingScheme". |
| Stanza | is_a.derived | AssociationPredicate.is_a.AssociationSource.AssociationTarget.associationQualifier | If present, need to include derived in the supportedAssociationQualifiers section |
| Stanza | intersection_of | None | Processed the same way that OWL intersection operator is processed.  This includes creation of anonymous sets. |
| Stanza | union_of | None | Same as OWL |
| Stanza | disjoint_from | None | Same as OWL |
| Stanza | relationship | associations. | No notes\\ |
| Stanza | relationship.not_necessary | AssociationTarget..associationQualifier | No notes |
| Stanza | relationship.inverse_necessary | AssociationTarget..associationQualifier | No notes |
| Stanza | relationship.namespace | None | If present, the supplied namespace becomes the owning "codingScheme". |
| Stanza | relationship.derived | AssociationTarget..associationQualifier | No notes |
| Stanza | relationship.cardinality | AssociationTarget..associationQualifier | No notes |
| Stanza | relationship.maxCardinality | AssociationTarget..associationQualifier | No notes |
| Stanza | relationship.minCardinality | AssociationTarget..associationQualifier | No notes |
| Stanza | is_obsolete | Entity.isActive = false | No notes |
| | | Entity.conceptStatus="is_obsolete" | No notes |
| Stanza | replaced_by | None | No notes |
| Stanza | consider | None | Not Mapped |
| Stanza | use_term | None | (deprecated) |
| dbxref | dbxref name | Entity.source | No notes\\ |
| dbxref | dbxref name | supportedSource | dbxref name format is  inconsistent.  In most cases, it can be the localName of  supportedSource, but special processing may be necessary in the case of  URL's, etc |
| dbxref | dbxref description | None | Not mapped. |
| dbxref | trailing modifiers | None | Not mapped. |
| typeDef Stanza | domain | AssociationPredicate.\['has_domain'\] | No notes\\ |
| typeDef Stanza | range | AssociationPredicate.\['has_range'\] | No notes |
| typeDef Stanza | is_cyclic | property\['is_cyclic'\] | No notes |
| typeDef Stanza | is_reflexive | property\['is_reflexive'\] | No notes |
| typeDef Stanza | is_reflexive | AssociationEntity.isReflexive | No notes |
| typeDef Stanza | is_symmetric | property\['is_symmetric'\] | No notes |
| typeDef Stanza | is_symmetric | association.isSymmetric | No notes |
| typeDef Stanza | is_transitive | property\['is_transitive'\] | No notes |
| typeDef Stanza | is_transitive | association.isTransitive | No notes |
| typeDef Stanza | inverse_of | association.inverse | No notes |
| instance stanza | id | same rules as general stanza | same rules as general stanza |
| instance stanza | name | same rules as general stanza | same rules as general stanza |
| instance stanza | instance_of | AssociationPredicate\['has_instance'\] | No notes\\ |
| instance stanza |instance_of |Entity.property.property="" |data type properties go in Coded Entry property section |
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