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This process will convert the currently existing database into a backup owl file stored in app/protégé/data/Protégé_xx/<PROTÉGÉ INSTANCE>. This file can then be used to be converted back to an OWL / RDF database, creating new tables and indexes to reflect any database related code / schema changes. The same owl file can also be used to update Dev, QA, and Stage. 
* Advertise that the production server will be going down.

* Run 'sh shutdown_protege_server localhost:2633.'

* Type 'ps \-ef \| grep rmiregistry' to retrieve the rmi regisry ID to kill.

* Once the ID is determined, type 'kill \-9 <rmi registry ID> '.

* Open up a Protégé Client instance from production environment, and click 'Create new Project, Check the 'Create from Existing Sources' box, Select OWL / RDF database and click 'Next', Select OWL Database and click 'Next', enter all necessary database information and click 'Finish'. The project should appear on the GUI.

* Click File, Convert File to Format, OWL / RDF file and convert. This will create an OWL file using the data from the database. Save the project as 'Thesaurus<YYMMDD>' or 'BiomedGT<YYMMDD>. Store this owl file in app/protégé/data/Protégé_x.x/<PROTÉGÉ INSTANCE>.

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