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National Cancer Institute Center for Bioinformatics
Product LexEVS 5.0 Release Notes
May 08 2009
Product Changes
- New Feature: Removed convenience methods for codeToName
EVS:CF#15222 - New Feature: Update to work with SDK 4.1
EVS:CF#15942 - New Feature: Javadocs should open in new window
EVS:CF#16686 - New Feature: LexBIG GUI launch support for OSX environment
EVS:CF#16989 - New Feature: Import RRF Representation of Relationship Groups
EVS:CF#17019 - New Feature: CodingSchemeId not present in exported LexGrid XML
EVS:CF#17183 - New Feature: OWL Loader Enhancements
EVS:CF#17233 - New Feature: Finalize BDA for 5.0 release
EVS:CF#17508 - New Feature: Model revisions & readiness for Silver/Gold Compatibility
(scope modified & approved 1/14/09)
EVS:CF#17509 - New Feature: 5.0 Data Services/SDK
EVS:CF#17511 - New Feature: 2009/01 model changes
(please see Gforge tracker for more detail on the nature of the changes and further descriptions)
EVS:CF#18449 - New Feature: Add 'namespace' to the Lucene Indexes
EVS:CF#19883 - New Feature: Change name of ProtegeFramesLoader to RadlexProtegeFramesLoader
EVS:CF#19888 - New Feature: Rename getParentsOf() and getChildrenOf()
EVS:CF#19889 - New Feature: Support query of non-concept entities
EVS:CF#19890 - New Feature: Creation of XSL stylesheets for transformation of LexBig data to n-1 LexBig versions
EVS:CF#20043
- Bug: Implement getAssociation for EVS API web service
EVS:CF#15091 - Bug: Two constructors create ConceptReferenceList methods throw exceptions
EVS:CF#15976 - Bug: Example to dump/query auxiliary metadata
EVS:CF#16508 - Bug: Better error handling for invalid search criteria in http interface
EVS:CF#16579 - Bug: Users should have the ability to request Search results be sorted
EVS:CF#17161 - Bug: Remove JUnit test dependency on 'Automobiles' vocab for LexEVS Grid Services
EVS:CF#17405 - Bug: Change -nf option to -fe (fail on error)
EVS:CF#17410 - Bug: EntityDescription not assigned to the NCI PT (rdfs:label) using Scrubber output
EVS:CF#17421 - Bug: LexBIG History 'getEditActionList' Error
EVS:CF#19411 - Bug: Owl loader fails when duplicate objectProperty is loaded from two namespaces
EVS:CF#19462 - Bug: Supported Coding Scheme default is set even when coding scheme name is specified in manifest
EVS:CF#19484 - Bug: Applying manifest with only an association forward/reverse name receives 'String index out of range' exception.
EVS:CF#19485 - Bug: CodedNodeGraph not resolving across ontology boundary
EVS:CF#19492 - Bug: Entity 'isActive' not being indexed correctly on Postgresql and MS Access
EVS:CF#19573 - Bug: Problem applying supportedNamespace
EVS:CF#19586 - Bug: Unable to load NCIT v9.01d and other large ontologies
EVS:CF#19600 - Bug: Equivalent CodingScheme on SupportedNamespace default value not being set correctly.
EVS:CF#19628 - Bug: Relationships not resolving that contain a Namespace that has a localId that does not match the CodingScheme.
EVS:CF#19629 - Bug: CodingSchemeProperties not being persisted to the database.
EVS:CF#19702 - Bug: LexBIG property behavior does not match EA model
EVS:CF#19716 - Bug: Transitivity Table not being built
EVS:CF#19741 - Bug: Supported Hierarchies not being fully populated in 2.3 - 5.0 Compatibility Test
EVS:CF#19864 - Bug: LexBIG 2.3 xml import command fails
EVS:CF#19900 - Bug: Metathesaurus history accessing wrong column name
EVS:CF#20032 - Bug: Owl loader ClassCast Exception while loading OWLObjectProperties
EVS:CF#20037 - Bug: Lucene Indexer fails with empty EntityDescription
EVS:CF#20068 - Bug: EMF loaders fail while inserting CodingScheme Properties
EVS:CF#20070 - Bug: Exception entering null into BIGINT column on PostgreSQL database.
EVS:CF#20193 - Bug: Blank description in the Service Context on grid portal
EVS:CF#20419
Important Remaining Issues
Make use of logging consistent - eliminate system out. We will address this if time permits
EVS:CF#14971
The NCI_Thesaurus association Has_Salt_Form and Has_Free_Acid_Or_Base needs reverse name. We will address this if time permits.
EVS:CF#15975
gov.nih.nci.evs.domain.Atom.getLUI
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EVS:CF#16678
Results not Deserializing Properly when using QueryModifiers on CQL Queries
EVS:CF#19406
Root concepts found by ListHierarchyMetaBySource when running against NCI MetaThesaurus with source set to NCI are different from root concepts in NCI Thesaurus.
EVS:CF#20354
CORE Product Dependencies
Refer to the CORE Product Dependency Matrix for the caCORE SDK and other software technologies on which this release of this product relies.
Release History
Release | Date |
---|---|
LexEVS 5.0 | 12 May 2009 |
LexEVS 4.2.1 | 30 January 2009 |
LexEVS 4.2 | 05 November 2008 |
EVS API 4.1.1 | 08 August 2008 |
EVS API 4.1 | 27 June 2008 |
EVS API 4.0 | 07 November 2007 |
caCORE 3.2 | 22 December 2006 |
caCORE 3.1 | 27 March 2006 |
caCORE 3.0.1.3 | 12 December 2006 |
caCORE 3.0.1.2 | 18 October 2005 |
caCORE 3.0.1.1 | 30 August 2005 |
caCORE 3.0.1 | 22 July 2005 |
caCORE 3.0 | 31 March 2005 |
caCORE 2.1 | 28 May 2004 |
caCORE 2.0.1 | 19 December 2003 |
caCORE 2.0 | 31 October 2003 |
caCORE 1.2 | 13 June 2003 |
caCORE 1.1 | 07 February 2003 |
caCORE 1.0 | 29 August 2002 |
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| https://gforge.nci.nih.gov/tracker/?func=detail&group_id=491&aid=16678&atid=1850]
Results not Deserializing Properly when using QueryModifiers on CQL Queries
[EVS:CF#19406 | https://gforge.nci.nih.gov/tracker/index.php?func=detail&aid=19406&group_id=491&atid=1850]
Root concepts found by ListHierarchyMetaBySource when running against NCI MetaThesaurus with source set to NCI are different from root concepts in NCI Thesaurus.
[EVS:CF#20354 | https://gforge.nci.nih.gov/tracker/index.php?func=detail&aid=20354&group_id=491&atid=1850]
h2. CORE Product Dependencies
Refer to the [CORE Product Dependency Matrix|https://wiki.nci.nih.gov/x/hIx8] for the caCORE SDK and other software technologies on which this release of this product relies.
h2. Release History
|| Release || Date ||
| LexEVS 5.0 \\ | 12 May 2009 \\ |
| LexEVS 4.2.1 \\ | 30 January 2009 \\ |
| LexEVS 4.2 \\ | 05 November 2008 \\ |
| EVS API 4.1.1 \\ | 08 August 2008 \\ |
| EVS API 4.1 \\ | 27 June 2008 \\ |
| EVS API 4.0 \\ | 07 November 2007 \\ |
| caCORE 3.2 \\ | 22 December 2006 \\ |
| caCORE 3.1 \\ | 27 March 2006 \\ |
| caCORE 3.0.1.3 \\ | 12 December 2006 \\ |
| caCORE 3.0.1.2 | 18 October 2005 \\ |
| caCORE 3.0.1.1 | 30 August 2005 \\ |
| caCORE 3.0.1 | 22 July 2005 \\ |
| caCORE 3.0 \\ | 31 March 2005 \\ |
| caCORE 2.1 \\ | 28 May 2004 \\ |
| caCORE 2.0.1 \\ | 19 December 2003 \\ |
| caCORE 2.0 \\ | 31 October 2003 \\ |
| caCORE 1.2 \\ | 13 June 2003 \\ |
| caCORE 1.1 \\ | 07 February 2003 \\ |
| caCORE 1.0 \\ | 29 August 2002 \\ |
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