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This page is a work in progress.

The Inferencing - 2021-10-27 page describes how to generate predictions from a model asset collection.

  • When doing so for an MT-CNN model, you can select a GDC manifest file (TXT) or a pathology report (TXT or PDF) as an input file.
  • Optional: If you want to evaluate the model with an output file, MoDaC accepts CSV files for that purpose. Make sure the number of rows of data in the output matches the number of rows of data in the input. 

The following attachments provide examples:

  File Modified

For more information on the GDC manifest file format, refer to the following page:

https://docs.gdc.cancer.gov/Encyclopedia/pages/Manifest_File/

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